Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
SNRPEP62304 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SNRPEP62304 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.08□□□□□ -0.16
SNRPEP62304 GDI1-215ENST00000630693 786 ntTSL 4 BASIC14.08□□□□□ -0.16
SNRPEP62304 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.08□□□□□ -0.16
SNRPEP62304 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SNRPEP62304 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.08□□□□□ -0.16
SNRPEP62304 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SNRPEP62304 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SNRPEP62304 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.08□□□□□ -0.16
SNRPEP62304 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SNRPEP62304 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SNRPEP62304 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.07□□□□□ -0.16
SNRPEP62304 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
SNRPEP62304 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SNRPEP62304 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SNRPEP62304 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SNRPEP62304 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SNRPEP62304 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.07□□□□□ -0.16
SNRPEP62304 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.07□□□□□ -0.16
SNRPEP62304 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.07□□□□□ -0.16
SNRPEP62304 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.07□□□□□ -0.16
SNRPEP62304 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
SNRPEP62304 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
SNRPEP62304 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
SNRPEP62304 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNRPEP62304 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SNRPEP62304 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.06□□□□□ -0.16
SNRPEP62304 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SNRPEP62304 AC006116.8-202ENST00000587620 1550 ntBASIC14.06□□□□□ -0.16
SNRPEP62304 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.06□□□□□ -0.16
SNRPEP62304 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.06□□□□□ -0.16
SNRPEP62304 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 MIR3648-2-201ENST00000581792 180 ntBASIC14.06□□□□□ -0.16
SNRPEP62304 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.06□□□□□ -0.16
SNRPEP62304 MIR3648-1-201ENST00000615959 180 ntBASIC14.06□□□□□ -0.16
SNRPEP62304 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 AL513523.2-202ENST00000427283 2040 ntBASIC14.06□□□□□ -0.16
SNRPEP62304 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SNRPEP62304 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SNRPEP62304 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.06□□□□□ -0.16
SNRPEP62304 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SNRPEP62304 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNRPEP62304 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.06□□□□□ -0.16
SNRPEP62304 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SNRPEP62304 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.06□□□□□ -0.16
SNRPEP62304 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms