Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP13P45452 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.06■□□□□ 0.64
MMP13P45452 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.05■□□□□ 0.64
MMP13P45452 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
MMP13P45452 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
MMP13P45452 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MMP13P45452 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MMP13P45452 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.05■□□□□ 0.64
MMP13P45452 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.05■□□□□ 0.64
MMP13P45452 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
MMP13P45452 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
MMP13P45452 MIR3180-5-201ENST00000583743 153 ntBASIC19.05■□□□□ 0.64
MMP13P45452 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
MMP13P45452 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MMP13P45452 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 AL357033.4-201ENST00000617703 1807 ntBASIC19.04■□□□□ 0.64
MMP13P45452 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.04■□□□□ 0.64
MMP13P45452 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
MMP13P45452 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
MMP13P45452 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.04■□□□□ 0.64
MMP13P45452 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.04■□□□□ 0.64
MMP13P45452 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.04■□□□□ 0.64
MMP13P45452 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.04■□□□□ 0.64
MMP13P45452 AC036111.1-201ENST00000533973 1582 ntBASIC19.04■□□□□ 0.64
MMP13P45452 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.04■□□□□ 0.64
MMP13P45452 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
MMP13P45452 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.04■□□□□ 0.64
MMP13P45452 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.04■□□□□ 0.64
MMP13P45452 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MMP13P45452 AC099398.1-201ENST00000567919 2776 ntBASIC19.04■□□□□ 0.64
MMP13P45452 SIRPAP1-201ENST00000448467 1770 ntBASIC19.04■□□□□ 0.64
MMP13P45452 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.04■□□□□ 0.64
MMP13P45452 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.04■□□□□ 0.64
MMP13P45452 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MMP13P45452 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.03■□□□□ 0.64
MMP13P45452 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
MMP13P45452 HMGA1P5-201ENST00000412453 271 ntBASIC19.03■□□□□ 0.64
MMP13P45452 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.03■□□□□ 0.64
MMP13P45452 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.03■□□□□ 0.64
MMP13P45452 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.03■□□□□ 0.64
MMP13P45452 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.03■□□□□ 0.64
MMP13P45452 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MMP13P45452 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
MMP13P45452 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
MMP13P45452 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP13P45452 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.03■□□□□ 0.64
MMP13P45452 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.03■□□□□ 0.64
MMP13P45452 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP13P45452 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP13P45452 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP13P45452 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP13P45452 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
MMP13P45452 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MMP13P45452 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP13P45452 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MMP13P45452 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MMP13P45452 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms