Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
USP8P40818 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
USP8P40818 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.96■□□□□ 0.79
USP8P40818 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP8P40818 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP8P40818 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP8P40818 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
USP8P40818 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.96■□□□□ 0.79
USP8P40818 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.96■□□□□ 0.79
USP8P40818 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP8P40818 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.96■□□□□ 0.79
USP8P40818 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.95■□□□□ 0.78
USP8P40818 AC036111.1-201ENST00000533973 1582 ntBASIC19.95■□□□□ 0.78
USP8P40818 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP8P40818 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.95■□□□□ 0.78
USP8P40818 MIR564-202ENST00000385049 94 ntBASIC19.95■□□□□ 0.78
USP8P40818 TSPY17P-201ENST00000450329 467 ntBASIC19.95■□□□□ 0.78
USP8P40818 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.95■□□□□ 0.78
USP8P40818 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.95■□□□□ 0.78
USP8P40818 AL023803.3-201ENST00000615559 522 ntBASIC19.95■□□□□ 0.78
USP8P40818 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.95■□□□□ 0.78
USP8P40818 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP8P40818 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.95■□□□□ 0.78
USP8P40818 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP8P40818 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
USP8P40818 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP8P40818 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 KRT8P45-201ENST00000414328 1447 ntBASIC19.94■□□□□ 0.78
USP8P40818 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.94■□□□□ 0.78
USP8P40818 KRT8P9-201ENST00000558927 1449 ntBASIC19.94■□□□□ 0.78
USP8P40818 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
USP8P40818 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
USP8P40818 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
USP8P40818 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.94■□□□□ 0.78
USP8P40818 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.94■□□□□ 0.78
USP8P40818 AL353719.1-201ENST00000566847 864 ntBASIC19.94■□□□□ 0.78
USP8P40818 MIR3180-5-201ENST00000583743 153 ntBASIC19.94■□□□□ 0.78
USP8P40818 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.94■□□□□ 0.78
USP8P40818 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.94■□□□□ 0.78
USP8P40818 AC116562.4-202ENST00000641738 218 ntBASIC19.94■□□□□ 0.78
USP8P40818 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.94■□□□□ 0.78
USP8P40818 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
USP8P40818 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
USP8P40818 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.94■□□□□ 0.78
USP8P40818 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.94■□□□□ 0.78
USP8P40818 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP8P40818 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.94■□□□□ 0.78
USP8P40818 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.94■□□□□ 0.78
USP8P40818 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.93■□□□□ 0.78
USP8P40818 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
USP8P40818 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP8P40818 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
USP8P40818 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
USP8P40818 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.93■□□□□ 0.78
USP8P40818 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.93■□□□□ 0.78
USP8P40818 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.93■□□□□ 0.78
USP8P40818 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP8P40818 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP8P40818 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms