Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DRAP01903 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.69■□□□□ 0.74
HLA-DRAP01903 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.69■□□□□ 0.74
HLA-DRAP01903 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRAP01903 HLA-F-220ENST00000434407 884 ntBASIC19.69■□□□□ 0.74
HLA-DRAP01903 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRAP01903 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRAP01903 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRAP01903 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DRAP01903 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.69■□□□□ 0.74
HLA-DRAP01903 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRAP01903 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRAP01903 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRAP01903 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRAP01903 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRAP01903 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRAP01903 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DRAP01903 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DRAP01903 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HLA-DRAP01903 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 AL049597.2-201ENST00000565575 961 ntBASIC19.68■□□□□ 0.74
HLA-DRAP01903 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.68■□□□□ 0.74
HLA-DRAP01903 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DRAP01903 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DRAP01903 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.67■□□□□ 0.74
HLA-DRAP01903 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 ABALON-201ENST00000629058 1903 ntBASIC19.67■□□□□ 0.74
HLA-DRAP01903 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HLA-DRAP01903 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 HBZP1-201ENST00000354915 429 ntBASIC19.67■□□□□ 0.74
HLA-DRAP01903 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DRAP01903 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.67■□□□□ 0.74
HLA-DRAP01903 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HLA-DRAP01903 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-DRAP01903 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DRAP01903 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HLA-DRAP01903 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HLA-DRAP01903 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.66■□□□□ 0.74
HLA-DRAP01903 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 LINC01238-205ENST00000567549 1107 ntBASIC19.66■□□□□ 0.74
HLA-DRAP01903 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-DRAP01903 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-DRAP01903 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DRAP01903 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HLA-DRAP01903 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DRAP01903 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms