Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB2O95900 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB2O95900 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB2O95900 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB2O95900 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
TRUB2O95900 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB2O95900 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.2■□□□□ 0.66
TRUB2O95900 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB2O95900 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.2■□□□□ 0.66
TRUB2O95900 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB2O95900 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB2O95900 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.2■□□□□ 0.66
TRUB2O95900 AC112907.2-201ENST00000448639 330 ntBASIC19.2■□□□□ 0.66
TRUB2O95900 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRUB2O95900 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRUB2O95900 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.2■□□□□ 0.66
TRUB2O95900 SDHAP2-201ENST00000455183 2001 ntBASIC19.2■□□□□ 0.66
TRUB2O95900 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB2O95900 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.2■□□□□ 0.66
TRUB2O95900 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB2O95900 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB2O95900 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.19■□□□□ 0.66
TRUB2O95900 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRUB2O95900 MIR149-201ENST00000384879 89 ntBASIC19.19■□□□□ 0.66
TRUB2O95900 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.19■□□□□ 0.66
TRUB2O95900 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.19■□□□□ 0.66
TRUB2O95900 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRUB2O95900 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRUB2O95900 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRUB2O95900 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB2O95900 NOC2LP1-202ENST00000452600 2235 ntBASIC19.19■□□□□ 0.66
TRUB2O95900 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB2O95900 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.18■□□□□ 0.66
TRUB2O95900 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRUB2O95900 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB2O95900 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB2O95900 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB2O95900 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.18■□□□□ 0.66
TRUB2O95900 AC009102.3-201ENST00000623118 1491 ntBASIC19.18■□□□□ 0.66
TRUB2O95900 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
TRUB2O95900 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB2O95900 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB2O95900 AC092597.1-201ENST00000487352 616 ntBASIC19.18■□□□□ 0.66
TRUB2O95900 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB2O95900 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.18■□□□□ 0.66
TRUB2O95900 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.18■□□□□ 0.66
TRUB2O95900 HYMAI.1-201ENST00000620949 238 ntBASIC19.18■□□□□ 0.66
TRUB2O95900 AC079602.3-201ENST00000623931 403 ntBASIC19.18■□□□□ 0.66
TRUB2O95900 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.18■□□□□ 0.66
TRUB2O95900 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB2O95900 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB2O95900 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB2O95900 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.18■□□□□ 0.66
TRUB2O95900 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.18■□□□□ 0.66
TRUB2O95900 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB2O95900 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TRUB2O95900 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRUB2O95900 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.17■□□□□ 0.66
TRUB2O95900 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.17■□□□□ 0.66
TRUB2O95900 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB2O95900 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB2O95900 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.17■□□□□ 0.66
TRUB2O95900 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB2O95900 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.17■□□□□ 0.66
TRUB2O95900 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB2O95900 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.17■□□□□ 0.66
TRUB2O95900 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.17■□□□□ 0.66
TRUB2O95900 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB2O95900 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.17■□□□□ 0.66
TRUB2O95900 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.17■□□□□ 0.66
TRUB2O95900 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.17■□□□□ 0.66
TRUB2O95900 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.17■□□□□ 0.66
TRUB2O95900 GMCL1P1-201ENST00000463439 1581 ntBASIC19.17■□□□□ 0.66
TRUB2O95900 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB2O95900 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB2O95900 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.17■□□□□ 0.66
TRUB2O95900 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.17■□□□□ 0.66
TRUB2O95900 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB2O95900 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB2O95900 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.17■□□□□ 0.66
TRUB2O95900 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB2O95900 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.17■□□□□ 0.66
TRUB2O95900 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms