Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SUPT3HO75486 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SUPT3HO75486 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SUPT3HO75486 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.18■□□□□ 0.5
SUPT3HO75486 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.18■□□□□ 0.5
SUPT3HO75486 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SUPT3HO75486 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.18■□□□□ 0.5
SUPT3HO75486 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.18■□□□□ 0.5
SUPT3HO75486 AC026471.5-201ENST00000615068 467 ntBASIC18.18■□□□□ 0.5
SUPT3HO75486 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SUPT3HO75486 TNRC18P3-201ENST00000441896 2691 ntBASIC18.18■□□□□ 0.5
SUPT3HO75486 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SUPT3HO75486 AC139713.2-201ENST00000641328 2723 ntBASIC18.18■□□□□ 0.5
SUPT3HO75486 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SUPT3HO75486 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.18■□□□□ 0.5
SUPT3HO75486 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.18■□□□□ 0.5
SUPT3HO75486 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.17■□□□□ 0.5
SUPT3HO75486 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.17■□□□□ 0.5
SUPT3HO75486 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SUPT3HO75486 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.17■□□□□ 0.5
SUPT3HO75486 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.17■□□□□ 0.5
SUPT3HO75486 MIR564-202ENST00000385049 94 ntBASIC18.17■□□□□ 0.5
SUPT3HO75486 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SUPT3HO75486 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.17■□□□□ 0.5
SUPT3HO75486 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.17■□□□□ 0.5
SUPT3HO75486 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.17■□□□□ 0.5
SUPT3HO75486 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.17■□□□□ 0.5
SUPT3HO75486 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.17■□□□□ 0.5
SUPT3HO75486 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.17■□□□□ 0.5
SUPT3HO75486 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SUPT3HO75486 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SUPT3HO75486 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SUPT3HO75486 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.17■□□□□ 0.5
SUPT3HO75486 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SUPT3HO75486 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.17■□□□□ 0.5
SUPT3HO75486 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SUPT3HO75486 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SUPT3HO75486 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SUPT3HO75486 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SUPT3HO75486 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.16■□□□□ 0.5
SUPT3HO75486 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SUPT3HO75486 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 CA15P1-201ENST00000481698 905 ntBASIC18.16■□□□□ 0.5
SUPT3HO75486 KRT18P41-201ENST00000518924 1277 ntBASIC18.16■□□□□ 0.5
SUPT3HO75486 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.16■□□□□ 0.5
SUPT3HO75486 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.16■□□□□ 0.5
SUPT3HO75486 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.16■□□□□ 0.5
SUPT3HO75486 Z99916.2-201ENST00000604037 246 ntBASIC18.16■□□□□ 0.5
SUPT3HO75486 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.16■□□□□ 0.5
SUPT3HO75486 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SUPT3HO75486 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SUPT3HO75486 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.15■□□□□ 0.5
SUPT3HO75486 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SUPT3HO75486 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SUPT3HO75486 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SUPT3HO75486 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.15■□□□□ 0.5
SUPT3HO75486 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SUPT3HO75486 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SUPT3HO75486 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SUPT3HO75486 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.15■□□□□ 0.5
SUPT3HO75486 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms