Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.85■□□□□ 0.61
TSPAN3O60637 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.85■□□□□ 0.61
TSPAN3O60637 CHCHD2P8-201ENST00000429873 447 ntBASIC18.85■□□□□ 0.61
TSPAN3O60637 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.85■□□□□ 0.61
TSPAN3O60637 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.85■□□□□ 0.61
TSPAN3O60637 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.85■□□□□ 0.61
TSPAN3O60637 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TSPAN3O60637 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.85■□□□□ 0.61
TSPAN3O60637 AC092329.2-201ENST00000598402 547 ntBASIC18.85■□□□□ 0.61
TSPAN3O60637 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.85■□□□□ 0.61
TSPAN3O60637 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.85■□□□□ 0.61
TSPAN3O60637 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TSPAN3O60637 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.85■□□□□ 0.61
TSPAN3O60637 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TSPAN3O60637 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TSPAN3O60637 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.85■□□□□ 0.61
TSPAN3O60637 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN3O60637 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN3O60637 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN3O60637 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN3O60637 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN3O60637 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.84■□□□□ 0.61
TSPAN3O60637 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.84■□□□□ 0.61
TSPAN3O60637 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.84■□□□□ 0.61
TSPAN3O60637 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TSPAN3O60637 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TSPAN3O60637 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN3O60637 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.84■□□□□ 0.61
TSPAN3O60637 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
TSPAN3O60637 MIR3180-1-201ENST00000580374 94 ntBASIC18.84■□□□□ 0.61
TSPAN3O60637 MIR3180-3-201ENST00000584616 94 ntBASIC18.84■□□□□ 0.61
TSPAN3O60637 AC012313.10-201ENST00000623509 926 ntBASIC18.84■□□□□ 0.61
TSPAN3O60637 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.84■□□□□ 0.61
TSPAN3O60637 HCG11-201ENST00000411553 5696 ntBASIC18.84■□□□□ 0.61
TSPAN3O60637 AC004408.2-201ENST00000623613 2777 ntBASIC18.84■□□□□ 0.61
TSPAN3O60637 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN3O60637 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN3O60637 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN3O60637 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN3O60637 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN3O60637 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN3O60637 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TSPAN3O60637 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TSPAN3O60637 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.84■□□□□ 0.61
TSPAN3O60637 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
TSPAN3O60637 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TSPAN3O60637 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TSPAN3O60637 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.83■□□□□ 0.61
TSPAN3O60637 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TSPAN3O60637 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.83■□□□□ 0.61
TSPAN3O60637 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TSPAN3O60637 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.83■□□□□ 0.6
TSPAN3O60637 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.83■□□□□ 0.6
TSPAN3O60637 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.83■□□□□ 0.6
TSPAN3O60637 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.83■□□□□ 0.6
TSPAN3O60637 IGHV3-41-201ENST00000613121 348 ntBASIC18.83■□□□□ 0.6
TSPAN3O60637 AC004263.2-201ENST00000617183 678 ntBASIC18.83■□□□□ 0.6
TSPAN3O60637 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TSPAN3O60637 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.83■□□□□ 0.6
TSPAN3O60637 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.83■□□□□ 0.6
TSPAN3O60637 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.83■□□□□ 0.6
TSPAN3O60637 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TSPAN3O60637 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
TSPAN3O60637 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN3O60637 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.82■□□□□ 0.6
TSPAN3O60637 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.82■□□□□ 0.6
TSPAN3O60637 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
TSPAN3O60637 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.82■□□□□ 0.6
TSPAN3O60637 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN3O60637 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms