Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SNAI2O43623 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SNAI2O43623 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SNAI2O43623 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.72□□□□□ -0.21
SNAI2O43623 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.72□□□□□ -0.21
SNAI2O43623 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
SNAI2O43623 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.72□□□□□ -0.21
SNAI2O43623 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.72□□□□□ -0.21
SNAI2O43623 MIR663A-201ENST00000385250 93 ntBASIC13.72□□□□□ -0.21
SNAI2O43623 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.72□□□□□ -0.21
SNAI2O43623 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.72□□□□□ -0.21
SNAI2O43623 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.72□□□□□ -0.21
SNAI2O43623 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.72□□□□□ -0.21
SNAI2O43623 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.72□□□□□ -0.21
SNAI2O43623 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.72□□□□□ -0.21
SNAI2O43623 AC060766.5-201ENST00000590539 871 ntBASIC13.72□□□□□ -0.21
SNAI2O43623 AC080038.1-201ENST00000611274 1154 ntBASIC13.72□□□□□ -0.21
SNAI2O43623 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 HLA-A-209ENST00000638375 975 ntBASIC13.72□□□□□ -0.21
SNAI2O43623 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SNAI2O43623 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.72□□□□□ -0.21
SNAI2O43623 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.72□□□□□ -0.21
SNAI2O43623 AC112777.1-201ENST00000540175 1423 ntBASIC13.72□□□□□ -0.21
SNAI2O43623 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNAI2O43623 GNAS-203ENST00000306120 1878 ntBASIC13.72□□□□□ -0.21
SNAI2O43623 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.72□□□□□ -0.21
SNAI2O43623 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SNAI2O43623 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SNAI2O43623 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
SNAI2O43623 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.71□□□□□ -0.21
SNAI2O43623 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.71□□□□□ -0.21
SNAI2O43623 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SNAI2O43623 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.71□□□□□ -0.21
SNAI2O43623 CDCA4P2-201ENST00000441182 718 ntBASIC13.71□□□□□ -0.21
SNAI2O43623 AL162430.1-201ENST00000480705 870 ntBASIC13.71□□□□□ -0.21
SNAI2O43623 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.71□□□□□ -0.21
SNAI2O43623 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.71□□□□□ -0.21
SNAI2O43623 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.71□□□□□ -0.21
SNAI2O43623 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.71□□□□□ -0.21
SNAI2O43623 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNAI2O43623 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SNAI2O43623 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SNAI2O43623 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.71□□□□□ -0.21
SNAI2O43623 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.71□□□□□ -0.21
SNAI2O43623 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SNAI2O43623 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNAI2O43623 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.71□□□□□ -0.22
SNAI2O43623 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.71□□□□□ -0.22
SNAI2O43623 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SNAI2O43623 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SNAI2O43623 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.71□□□□□ -0.22
SNAI2O43623 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNAI2O43623 AL499627.1-201ENST00000569373 2188 ntBASIC13.71□□□□□ -0.22
SNAI2O43623 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNAI2O43623 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNAI2O43623 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
SNAI2O43623 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNAI2O43623 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SNAI2O43623 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SNAI2O43623 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SNAI2O43623 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.7□□□□□ -0.22
SNAI2O43623 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.7□□□□□ -0.22
SNAI2O43623 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.7□□□□□ -0.22
SNAI2O43623 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms