Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
THUMPD1Q9NXG2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD1Q9NXG2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.29■□□□□ 0.36
THUMPD1Q9NXG2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD1Q9NXG2 GNAS-203ENST00000306120 1878 ntBASIC17.29■□□□□ 0.36
THUMPD1Q9NXG2 AC093677.2-201ENST00000600169 1863 ntBASIC17.29■□□□□ 0.36
THUMPD1Q9NXG2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD1Q9NXG2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 RPS2P55-201ENST00000397318 883 ntBASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 AC107956.1-201ENST00000494359 873 ntBASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
THUMPD1Q9NXG2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 LINC00896-202ENST00000609602 2128 ntBASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 ABHD17AP1-201ENST00000358206 933 ntBASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 AC142381.4-202ENST00000563973 229 ntBASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 MIR3180-5-201ENST00000583743 153 ntBASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD1Q9NXG2 KRT8P7-201ENST00000533003 1432 ntBASIC17.27■□□□□ 0.35
THUMPD1Q9NXG2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD1Q9NXG2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.27■□□□□ 0.35
THUMPD1Q9NXG2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.27■□□□□ 0.35
THUMPD1Q9NXG2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD1Q9NXG2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.27■□□□□ 0.35
THUMPD1Q9NXG2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD1Q9NXG2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD1Q9NXG2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD1Q9NXG2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD1Q9NXG2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD1Q9NXG2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 GPAT2P1-201ENST00000444924 1672 ntBASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 AC233702.5-201ENST00000584107 538 ntBASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD1Q9NXG2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD1Q9NXG2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD1Q9NXG2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.25■□□□□ 0.35
THUMPD1Q9NXG2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD1Q9NXG2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
THUMPD1Q9NXG2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms