Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRF2Q9HAW0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 AL596275.1-201ENST00000423464 877 ntBASIC17.54■□□□□ 0.4
BRF2Q9HAW0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 AC009947.2-201ENST00000444014 672 ntBASIC17.54■□□□□ 0.4
BRF2Q9HAW0 ECEL1P2-202ENST00000465689 757 ntBASIC17.54■□□□□ 0.4
BRF2Q9HAW0 SEC1P-202ENST00000473944 940 ntBASIC17.54■□□□□ 0.4
BRF2Q9HAW0 AC093827.2-201ENST00000512654 315 ntBASIC17.54■□□□□ 0.4
BRF2Q9HAW0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 AC068880.1-201ENST00000507289 2297 ntBASIC17.54■□□□□ 0.4
BRF2Q9HAW0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRF2Q9HAW0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 AC018470.1-201ENST00000624790 3129 ntBASIC17.53■□□□□ 0.4
BRF2Q9HAW0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 AP000523.1-201ENST00000398242 1049 ntBASIC17.53■□□□□ 0.4
BRF2Q9HAW0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.53■□□□□ 0.4
BRF2Q9HAW0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRF2Q9HAW0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 KRT18P22-201ENST00000402024 1347 ntBASIC17.52■□□□□ 0.4
BRF2Q9HAW0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.52■□□□□ 0.4
BRF2Q9HAW0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms