Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FBXO39Q8N4B4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FBXO39Q8N4B4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 AL499627.1-201ENST00000569373 2188 ntBASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 AL354751.1-201ENST00000412768 1863 ntBASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
FBXO39Q8N4B4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 KRT18P48-201ENST00000434763 852 ntBASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 KRT126P-201ENST00000549467 1181 ntBASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
FBXO39Q8N4B4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FBXO39Q8N4B4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 AP000523.1-201ENST00000398242 1049 ntBASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
FBXO39Q8N4B4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms