Protein–RNA interactions for Protein: Q5TCZ1

SH3PXD2A, SH3 and PX domain-containing protein 2A, humanhuman

Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2AQ5TCZ1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 HCG4P8-203ENST00000443049 980 ntBASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 FAM86EP-206ENST00000510506 987 ntBASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 GCSHP2-201ENST00000560971 527 ntBASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 NEK4P2-201ENST00000580004 1012 ntBASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 AL121956.5-201ENST00000625261 221 ntBASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SH3PXD2AQ5TCZ1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 AL354751.1-201ENST00000412768 1863 ntBASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 COX11P1-201ENST00000489116 835 ntBASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 AC010240.3-201ENST00000607688 395 ntBASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SH3PXD2AQ5TCZ1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 AL441883.1-201ENST00000566170 1045 ntBASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 AL390961.4-201ENST00000623958 2535 ntBASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH3PXD2AQ5TCZ1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SH3PXD2AQ5TCZ1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH3PXD2AQ5TCZ1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.21■□□□□ 0.67
SH3PXD2AQ5TCZ1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.21■□□□□ 0.67
SH3PXD2AQ5TCZ1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.21■□□□□ 0.67
SH3PXD2AQ5TCZ1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3PXD2AQ5TCZ1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3PXD2AQ5TCZ1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SH3PXD2AQ5TCZ1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH3PXD2AQ5TCZ1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms