Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RAB1AP62820 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB1AP62820 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB1AP62820 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB1AP62820 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB1AP62820 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB1AP62820 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB1AP62820 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB1AP62820 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB1AP62820 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB1AP62820 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB1AP62820 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB1AP62820 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB1AP62820 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB1AP62820 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB1AP62820 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB1AP62820 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB1AP62820 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB1AP62820 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB1AP62820 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RAB1AP62820 RNF152P1-201ENST00000397754 604 ntBASIC16.13■□□□□ 0.17
RAB1AP62820 TSPY5P-201ENST00000426936 936 ntBASIC16.13■□□□□ 0.17
RAB1AP62820 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.13■□□□□ 0.17
RAB1AP62820 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB1AP62820 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB1AP62820 AC009065.1-201ENST00000564055 1225 ntBASIC16.13■□□□□ 0.17
RAB1AP62820 AL441883.1-201ENST00000566170 1045 ntBASIC16.13■□□□□ 0.17
RAB1AP62820 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB1AP62820 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB1AP62820 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB1AP62820 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RAB1AP62820 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB1AP62820 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB1AP62820 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RAB1AP62820 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB1AP62820 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB1AP62820 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB1AP62820 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB1AP62820 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
RAB1AP62820 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB1AP62820 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
RAB1AP62820 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB1AP62820 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB1AP62820 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
RAB1AP62820 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RAB1AP62820 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB1AP62820 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.12■□□□□ 0.17
RAB1AP62820 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.12■□□□□ 0.17
RAB1AP62820 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB1AP62820 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB1AP62820 MIR3180-4-201ENST00000582223 153 ntBASIC16.12■□□□□ 0.17
RAB1AP62820 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.12■□□□□ 0.17
RAB1AP62820 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.12■□□□□ 0.17
RAB1AP62820 AC010240.3-201ENST00000607688 395 ntBASIC16.12■□□□□ 0.17
RAB1AP62820 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
RAB1AP62820 AL163051.1-201ENST00000569214 1512 ntBASIC16.12■□□□□ 0.17
RAB1AP62820 AC005332.8-201ENST00000622750 2735 ntBASIC16.12■□□□□ 0.17
RAB1AP62820 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB1AP62820 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB1AP62820 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB1AP62820 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RAB1AP62820 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB1AP62820 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB1AP62820 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 AC034232.1-201ENST00000506026 1064 ntBASIC16.11■□□□□ 0.17
RAB1AP62820 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 MIR3917-201ENST00000580971 93 ntBASIC16.11■□□□□ 0.17
RAB1AP62820 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB1AP62820 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RAB1AP62820 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB1AP62820 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAB1AP62820 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RAB1AP62820 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB1AP62820 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms