Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.8■□□□□ 0.44
CNOT3O75175 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CNOT3O75175 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 GPAT2P1-201ENST00000444924 1672 ntBASIC17.8■□□□□ 0.44
CNOT3O75175 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CNOT3O75175 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CNOT3O75175 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CNOT3O75175 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNOT3O75175 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CNOT3O75175 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT3O75175 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.79■□□□□ 0.44
CNOT3O75175 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CNOT3O75175 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CNOT3O75175 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT3O75175 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 AL359075.1-203ENST00000462729 1002 ntBASIC17.79■□□□□ 0.44
CNOT3O75175 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.79■□□□□ 0.44
CNOT3O75175 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CNOT3O75175 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.79■□□□□ 0.44
CNOT3O75175 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT3O75175 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.79■□□□□ 0.44
CNOT3O75175 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CNOT3O75175 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CNOT3O75175 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CNOT3O75175 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.79■□□□□ 0.44
CNOT3O75175 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT3O75175 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.79■□□□□ 0.44
CNOT3O75175 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.78■□□□□ 0.44
CNOT3O75175 CROCCP3-202ENST00000420820 1947 ntBASIC17.78■□□□□ 0.44
CNOT3O75175 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CNOT3O75175 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CNOT3O75175 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CNOT3O75175 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT3O75175 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.78■□□□□ 0.44
CNOT3O75175 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
CNOT3O75175 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT3O75175 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 AC092647.4-201ENST00000457211 535 ntBASIC17.78■□□□□ 0.44
CNOT3O75175 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT3O75175 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 LINC01238-205ENST00000567549 1107 ntBASIC17.78■□□□□ 0.44
CNOT3O75175 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CNOT3O75175 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.78■□□□□ 0.44
CNOT3O75175 AC140113.3-201ENST00000605663 199 ntBASIC17.78■□□□□ 0.44
CNOT3O75175 AL031432.5-201ENST00000641059 760 ntBASIC17.78■□□□□ 0.44
CNOT3O75175 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CNOT3O75175 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CNOT3O75175 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.78■□□□□ 0.44
CNOT3O75175 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT3O75175 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.77■□□□□ 0.44
CNOT3O75175 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.77■□□□□ 0.44
CNOT3O75175 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CNOT3O75175 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
CNOT3O75175 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT3O75175 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
CNOT3O75175 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms