Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 MIR3917-201ENST00000580971 93 ntBASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.55■□□□□ 0.88
COL4A3BPQ9Y5P4 AC005332.1-201ENST00000577698 1310 ntBASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 HBZP1-201ENST00000354915 429 ntBASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 AC092597.1-201ENST00000487352 616 ntBASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 AC104390.1-201ENST00000555663 520 ntBASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 AL136038.3-201ENST00000561909 1096 ntBASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 AL157888.1-201ENST00000631930 593 ntBASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL4A3BPQ9Y5P4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 VENTXP5-201ENST00000523979 775 ntBASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 AC135050.7-201ENST00000624508 2218 ntBASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL4A3BPQ9Y5P4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 IER3-202ENST00000376377 1350 ntBASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 UPK3BP1-201ENST00000428678 509 ntBASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 SPDYE13P-201ENST00000445314 798 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms