Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 SAMD4B-212ENST00000602243 672 ntTSL 339.71■■■■□ 3.954e-10■■□□□ 12.8
DROSHAQ9NRR4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC31.97■■■□□ 2.714e-10■■□□□ 12.8
DROSHAQ9NRR4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.864e-10■■□□□ 12.8
DROSHAQ9NRR4 DOCK6-211ENST00000590452 231 ntTSL 316.08■□□□□ 0.164e-6■■□□□ 12.8
DROSHAQ9NRR4 ACTB-203ENST00000417101 472 ntTSL 434.06■■■■□ 3.042e-35■■□□□ 12.8
DROSHAQ9NRR4 MICALL2-214ENST00000493998 404 ntTSL 219.84■□□□□ 0.776e-8■■□□□ 12.8
DROSHAQ9NRR4 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.495e-7■■□□□ 12.7
DROSHAQ9NRR4 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.55e-7■■□□□ 12.7
DROSHAQ9NRR4 SRC-206ENST00000472968 461 ntTSL 326.49■■□□□ 1.831e-6■■□□□ 12.7
DROSHAQ9NRR4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.86■□□□□ 0.451e-6■■□□□ 12.7
DROSHAQ9NRR4 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.161e-6■■□□□ 12.7
DROSHAQ9NRR4 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.091e-6■■□□□ 12.7
DROSHAQ9NRR4 SRC-201ENST00000358208 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.051e-6■■□□□ 12.7
DROSHAQ9NRR4 GATA2-205ENST00000492608 844 ntTSL 330.25■■■□□ 2.432e-7■■□□□ 12.7
DROSHAQ9NRR4 GATA2-206ENST00000498200 563 ntTSL 229.28■■■□□ 2.282e-7■■□□□ 12.7
DROSHAQ9NRR4 FLNB-210ENST00000481470 6497 ntTSL 1 (best)11.04□□□□□ -0.641e-9■■□□□ 12.7
DROSHAQ9NRR4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC34.33■■■■□ 3.092e-6■■□□□ 12.7
DROSHAQ9NRR4 ATP6V0B-208ENST00000473485 1664 ntTSL 233.74■■■□□ 2.992e-6■■□□□ 12.7
DROSHAQ9NRR4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.852e-6■■□□□ 12.7
DROSHAQ9NRR4 ATP6V0B-203ENST00000468183 2432 ntTSL 1 (best)31.36■■■□□ 2.612e-6■■□□□ 12.7
DROSHAQ9NRR4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC30.01■■■□□ 2.392e-6■■□□□ 12.7
DROSHAQ9NRR4 ATP6V0B-206ENST00000472277 536 ntTSL 328.75■■■□□ 2.192e-6■■□□□ 12.7
DROSHAQ9NRR4 ATP6V0B-202ENST00000461670 530 ntTSL 527.39■■□□□ 1.982e-6■■□□□ 12.7
DROSHAQ9NRR4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC24.56■■□□□ 1.522e-6■■□□□ 12.7
DROSHAQ9NRR4 ATP6V0B-209ENST00000496131 962 ntTSL 321.41■■□□□ 1.022e-6■■□□□ 12.7
DROSHAQ9NRR4 ATP6V0B-207ENST00000472505 411 ntTSL 520.04■□□□□ 0.82e-6■■□□□ 12.7
DROSHAQ9NRR4 TRAF4-207ENST00000461195 787 ntTSL 234.48■■■■□ 3.111e-7■■□□□ 12.7
DROSHAQ9NRR4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC33.63■■■□□ 2.971e-7■■□□□ 12.7
DROSHAQ9NRR4 TRAF4-203ENST00000394925 702 ntTSL 233.62■■■□□ 2.971e-7■■□□□ 12.7
DROSHAQ9NRR4 TRAF4-204ENST00000422344 631 ntTSL 333.62■■■□□ 2.971e-7■■□□□ 12.7
DROSHAQ9NRR4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC33.62■■■□□ 2.971e-7■■□□□ 12.7
DROSHAQ9NRR4 TRAF4-216ENST00000586813 789 ntTSL 330.51■■■□□ 2.471e-7■■□□□ 12.7
DROSHAQ9NRR4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.61e-7■■□□□ 12.7
DROSHAQ9NRR4 TRAF4-212ENST00000498540 748 ntTSL 323.58■■□□□ 1.371e-7■■□□□ 12.7
DROSHAQ9NRR4 TRAF4-210ENST00000475329 544 ntTSL 320.8■□□□□ 0.921e-7■■□□□ 12.7
DROSHAQ9NRR4 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC19.02■□□□□ 0.641e-7■■□□□ 12.7
DROSHAQ9NRR4 AGXT-203ENST00000472436 1034 ntTSL 221.08■□□□□ 0.965e-7■■□□□ 12.7
DROSHAQ9NRR4 MIR452-201ENST00000385020 85 ntBASIC0.55□□□□□ -2.325e-7■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC36.29■■■■□ 3.44e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC34.85■■■■□ 3.174e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.614e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-212ENST00000583564 377 ntTSL 330.93■■■□□ 2.544e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC29.74■■■□□ 2.354e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-209ENST00000579698 572 ntTSL 428.97■■■□□ 2.234e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC27.35■■□□□ 1.974e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-214ENST00000585215 767 ntTSL 426.43■■□□□ 1.824e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-210ENST00000581271 528 ntTSL 426.13■■□□□ 1.774e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC25.98■■□□□ 1.754e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-206ENST00000577624 510 ntTSL 325.98■■□□□ 1.754e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.594e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-205ENST00000405481 841 ntTSL 223.19■■□□□ 1.34e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-211ENST00000582198 868 ntTSL 521.34■■□□□ 1.014e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-215ENST00000585244 578 ntTSL 421.32■■□□□ 14e-8■■□□□ 12.7
DROSHAQ9NRR4 PYCR1-208ENST00000579366 681 ntTSL 317.86■□□□□ 0.454e-8■■□□□ 12.7
DROSHAQ9NRR4 TUBB2A-202ENST00000489942 817 ntTSL 224.86■■□□□ 1.575e-7■■□□□ 12.7
DROSHAQ9NRR4 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.845e-7■■□□□ 12.7
DROSHAQ9NRR4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.844e-9■■□□□ 12.7
DROSHAQ9NRR4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC31.95■■■□□ 2.74e-9■■□□□ 12.7
DROSHAQ9NRR4 STX5-207ENST00000491231 1719 ntTSL 531.77■■■□□ 2.684e-9■■□□□ 12.7
DROSHAQ9NRR4 STX5-208ENST00000492066 1627 ntTSL 530.07■■■□□ 2.44e-9■■□□□ 12.7
DROSHAQ9NRR4 STX5-205ENST00000486437 560 ntTSL 429.72■■■□□ 2.354e-9■■□□□ 12.7
DROSHAQ9NRR4 AURKA-210ENST00000422322 744 ntTSL 329.65■■■□□ 2.342e-10■■□□□ 12.7
DROSHAQ9NRR4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC28.43■■■□□ 2.144e-9■■□□□ 12.7
DROSHAQ9NRR4 STX5-206ENST00000488303 604 ntTSL 525.44■■□□□ 1.664e-9■■□□□ 12.7
DROSHAQ9NRR4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC36.06■■■■□ 3.361e-7■■□□□ 12.7
DROSHAQ9NRR4 RCOR3-205ENST00000472734 452 ntTSL 232.58■■■□□ 2.811e-7■■□□□ 12.7
DROSHAQ9NRR4 RCOR3-216ENST00000534478 564 ntTSL 426.46■■□□□ 1.831e-7■■□□□ 12.7
DROSHAQ9NRR4 RCOR3-210ENST00000528408 570 ntTSL 225■■□□□ 1.591e-7■■□□□ 12.7
DROSHAQ9NRR4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC24.54■■□□□ 1.521e-7■■□□□ 12.7
DROSHAQ9NRR4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.231e-7■■□□□ 12.7
DROSHAQ9NRR4 RCOR3-211ENST00000528926 1497 ntTSL 220.67■□□□□ 0.91e-7■■□□□ 12.7
DROSHAQ9NRR4 RCOR3-214ENST00000533469 540 ntTSL 414.45□□□□□ -0.11e-7■■□□□ 12.7
DROSHAQ9NRR4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC7.63□□□□□ -1.191e-7■■□□□ 12.7
DROSHAQ9NRR4 RCOR3-212ENST00000529572 1022 ntTSL 55.83□□□□□ -1.481e-7■■□□□ 12.7
DROSHAQ9NRR4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC34.49■■■■□ 3.113e-7■■□□□ 12.7
DROSHAQ9NRR4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC27.25■■□□□ 1.953e-7■■□□□ 12.7
DROSHAQ9NRR4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC27.25■■□□□ 1.953e-7■■□□□ 12.7
DROSHAQ9NRR4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.613e-7■■□□□ 12.7
DROSHAQ9NRR4 PYCR2-206ENST00000478402 3149 ntTSL 221.44■■□□□ 1.023e-7■■□□□ 12.7
DROSHAQ9NRR4 CCDC183-202ENST00000371682 1437 ntTSL 524.67■■□□□ 1.546e-7■■□□□ 12.7
DROSHAQ9NRR4 TMC6-214ENST00000590162 517 ntTSL 223.01■■□□□ 1.271e-23■■□□□ 12.7
DROSHAQ9NRR4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC23.94■■□□□ 1.422e-6■■□□□ 12.6
DROSHAQ9NRR4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC23.77■■□□□ 1.392e-6■■□□□ 12.6
DROSHAQ9NRR4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC22.8■■□□□ 1.242e-6■■□□□ 12.6
DROSHAQ9NRR4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.152e-6■■□□□ 12.6
DROSHAQ9NRR4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC18.73■□□□□ 0.592e-6■■□□□ 12.6
DROSHAQ9NRR4 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.542e-6■■□□□ 12.6
DROSHAQ9NRR4 SYCP2L-202ENST00000341041 3069 ntTSL 217.73■□□□□ 0.432e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-212ENST00000530836 1613 ntTSL 532.02■■■□□ 2.723e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-208ENST00000527797 1609 ntTSL 531.79■■■□□ 2.683e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-206ENST00000526734 570 ntTSL 231.68■■■□□ 2.663e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-209ENST00000528142 1821 ntTSL 331.04■■■□□ 2.563e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-205ENST00000526204 2120 ntTSL 530.92■■■□□ 2.543e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-207ENST00000526977 2036 ntTSL 528.45■■■□□ 2.143e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-213ENST00000530983 2337 ntTSL 527.75■■■□□ 2.033e-6■■□□□ 12.6
DROSHAQ9NRR4 WDR26-208ENST00000486652 2867 ntTSL 1 (best)25.53■■□□□ 1.689e-13■■□□□ 12.6
DROSHAQ9NRR4 VPS28-215ENST00000531924 695 ntTSL 322.91■■□□□ 1.263e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.863e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC20.44■□□□□ 0.863e-6■■□□□ 12.6
DROSHAQ9NRR4 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC20.44■□□□□ 0.863e-6■■□□□ 12.6
Retrieved 100 of 16,331 protein–RNA pairs in 99.3 ms