Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 AL499627.1-201ENST00000569373 2188 ntBASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTDSP1Q9GZU7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTDSP1Q9GZU7 TFP1-202ENST00000475455 1573 ntBASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 SLC7A5P1-201ENST00000568957 537 ntBASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTDSP1Q9GZU7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms