Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SSMEM1Q8WWF3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SSMEM1Q8WWF3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.25■□□□□ 0.03
SSMEM1Q8WWF3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSMEM1Q8WWF3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SSMEM1Q8WWF3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSMEM1Q8WWF3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 WIZP1-201ENST00000531444 2299 ntBASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 AL031133.1-201ENST00000406807 723 ntBASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 AL121956.5-201ENST00000625261 221 ntBASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 AL358472.4-201ENST00000633140 710 ntBASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 AL390961.4-201ENST00000623958 2535 ntBASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.24■□□□□ 0.03
SSMEM1Q8WWF3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 UPK3BP1-201ENST00000428678 509 ntBASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.23■□□□□ 0.03
SSMEM1Q8WWF3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSMEM1Q8WWF3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms