Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.35■□□□□ 0.53
CBX6O95503 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.35■□□□□ 0.53
CBX6O95503 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.35■□□□□ 0.53
CBX6O95503 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CBX6O95503 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CBX6O95503 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.35■□□□□ 0.53
CBX6O95503 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.35■□□□□ 0.53
CBX6O95503 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.35■□□□□ 0.53
CBX6O95503 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.35■□□□□ 0.53
CBX6O95503 AL445228.2-201ENST00000605589 952 ntBASIC18.35■□□□□ 0.53
CBX6O95503 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.35■□□□□ 0.53
CBX6O95503 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CBX6O95503 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.35■□□□□ 0.53
CBX6O95503 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.35■□□□□ 0.53
CBX6O95503 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.35■□□□□ 0.53
CBX6O95503 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBX6O95503 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.34■□□□□ 0.53
CBX6O95503 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CBX6O95503 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX6O95503 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX6O95503 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CBX6O95503 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBX6O95503 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CBX6O95503 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CBX6O95503 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.34■□□□□ 0.53
CBX6O95503 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.34■□□□□ 0.53
CBX6O95503 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.34■□□□□ 0.53
CBX6O95503 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CBX6O95503 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CBX6O95503 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CBX6O95503 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CBX6O95503 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.34■□□□□ 0.53
CBX6O95503 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.34■□□□□ 0.53
CBX6O95503 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CBX6O95503 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CBX6O95503 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
CBX6O95503 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.33■□□□□ 0.53
CBX6O95503 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.33■□□□□ 0.53
CBX6O95503 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.33■□□□□ 0.53
CBX6O95503 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.33■□□□□ 0.53
CBX6O95503 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CBX6O95503 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.33■□□□□ 0.53
CBX6O95503 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBX6O95503 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBX6O95503 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CBX6O95503 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CBX6O95503 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBX6O95503 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
CBX6O95503 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CBX6O95503 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBX6O95503 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBX6O95503 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBX6O95503 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.33■□□□□ 0.52
CBX6O95503 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.33■□□□□ 0.52
CBX6O95503 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBX6O95503 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CBX6O95503 AL390719.1-204ENST00000412397 1219 ntBASIC18.33■□□□□ 0.52
CBX6O95503 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CBX6O95503 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.33■□□□□ 0.52
CBX6O95503 CD177P1-201ENST00000606252 935 ntBASIC18.33■□□□□ 0.52
CBX6O95503 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CBX6O95503 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.33■□□□□ 0.52
CBX6O95503 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CBX6O95503 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CBX6O95503 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.33■□□□□ 0.52
CBX6O95503 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.33■□□□□ 0.52
CBX6O95503 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.33■□□□□ 0.52
CBX6O95503 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.33■□□□□ 0.52
CBX6O95503 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBX6O95503 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CBX6O95503 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBX6O95503 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CBX6O95503 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.33■□□□□ 0.52
CBX6O95503 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CBX6O95503 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.32■□□□□ 0.52
CBX6O95503 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CBX6O95503 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CBX6O95503 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CBX6O95503 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBX6O95503 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms