Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SRRM3A6NNA2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRRM3A6NNA2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRRM3A6NNA2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.07■□□□□ 0.64
SRRM3A6NNA2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 NBPF21P-201ENST00000425093 1451 ntBASIC19.06■□□□□ 0.64
SRRM3A6NNA2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 AP002982.1-201ENST00000492365 877 ntBASIC19.06■□□□□ 0.64
SRRM3A6NNA2 AC116562.2-201ENST00000507042 360 ntBASIC19.06■□□□□ 0.64
SRRM3A6NNA2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SRRM3A6NNA2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 FAM8A6P-201ENST00000407496 1135 ntBASIC19.05■□□□□ 0.64
SRRM3A6NNA2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 AC093458.2-201ENST00000623150 629 ntBASIC19.05■□□□□ 0.64
SRRM3A6NNA2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.05■□□□□ 0.64
SRRM3A6NNA2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 CLEC4GP1-201ENST00000596555 870 ntBASIC19.04■□□□□ 0.64
SRRM3A6NNA2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM3A6NNA2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms