Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 AC023632.3-201ENST00000521633 145 ntBASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.23□□□□□ -0.29
CHTOPQ9Y3Y2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 AL136116.3-201ENST00000402907 1138 ntBASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 AL591742.1-201ENST00000604433 565 ntBASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHTOPQ9Y3Y2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHTOPQ9Y3Y2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHTOPQ9Y3Y2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CHTOPQ9Y3Y2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHTOPQ9Y3Y2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms