Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHA7Q9UN72 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 AP003041.3-201ENST00000527151 707 ntBASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 FLJ13224-201ENST00000313737 1514 ntBASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA7Q9UN72 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 RBM17P1-201ENST00000453646 1190 ntBASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA7Q9UN72 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 AL353719.1-201ENST00000566847 864 ntBASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 LINC00896-202ENST00000609602 2128 ntBASIC20.9■□□□□ 0.94
PCDHA7Q9UN72 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms