Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 RCC2P3-201ENST00000418112 1537 ntBASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN3Q9NQS3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NECTIN3Q9NQS3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NECTIN3Q9NQS3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NECTIN3Q9NQS3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.64■□□□□ 0.42
NECTIN3Q9NQS3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 AL138966.2-201ENST00000621997 464 ntBASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 AC092865.7-201ENST00000641832 219 ntBASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.64■□□□□ 0.41
NECTIN3Q9NQS3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 KRT8P32-201ENST00000512863 1461 ntBASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 MCCD1P1-208ENST00000445732 328 ntBASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 CR769767.2-201ENST00000622735 460 ntBASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.63■□□□□ 0.41
NECTIN3Q9NQS3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 AL031598.1-201ENST00000561511 1773 ntBASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms