Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TIFAQ96CG3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.64■□□□□ 0.73
TIFAQ96CG3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TIFAQ96CG3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 AC105339.3-201ENST00000560043 636 ntBASIC19.63■□□□□ 0.73
TIFAQ96CG3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 AC025062.2-201ENST00000605477 670 ntBASIC19.63■□□□□ 0.73
TIFAQ96CG3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
TIFAQ96CG3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIFAQ96CG3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 KRT8P32-201ENST00000512863 1461 ntBASIC19.62■□□□□ 0.73
TIFAQ96CG3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 TCF3P1-201ENST00000423021 1937 ntBASIC19.62■□□□□ 0.73
TIFAQ96CG3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TIFAQ96CG3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TIFAQ96CG3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TIFAQ96CG3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TIFAQ96CG3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TIFAQ96CG3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TIFAQ96CG3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 AL035633.1-201ENST00000406139 838 ntBASIC19.61■□□□□ 0.73
TIFAQ96CG3 ABCD1P5-201ENST00000445663 754 ntBASIC19.61■□□□□ 0.73
TIFAQ96CG3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TIFAQ96CG3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TIFAQ96CG3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TIFAQ96CG3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.61■□□□□ 0.73
TIFAQ96CG3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TIFAQ96CG3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TIFAQ96CG3 AL391422.3-201ENST00000603791 2761 ntBASIC19.61■□□□□ 0.73
TIFAQ96CG3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TIFAQ96CG3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TIFAQ96CG3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
TIFAQ96CG3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TIFAQ96CG3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
TIFAQ96CG3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.6■□□□□ 0.73
TIFAQ96CG3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TIFAQ96CG3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TIFAQ96CG3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TIFAQ96CG3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TIFAQ96CG3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms