Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKL1Q00532 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.12■□□□□ 0.49
CDKL1Q00532 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.12■□□□□ 0.49
CDKL1Q00532 WWOX-216ENST00000569818 525 ntBASIC18.12■□□□□ 0.49
CDKL1Q00532 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL1Q00532 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CDKL1Q00532 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CDKL1Q00532 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDKL1Q00532 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL1Q00532 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDKL1Q00532 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKL1Q00532 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKL1Q00532 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKL1Q00532 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CDKL1Q00532 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKL1Q00532 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKL1Q00532 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDKL1Q00532 AL390955.1-201ENST00000428694 934 ntBASIC18.11■□□□□ 0.49
CDKL1Q00532 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKL1Q00532 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 BX088651.1-201ENST00000540551 451 ntBASIC18.11■□□□□ 0.49
CDKL1Q00532 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 AC010653.2-201ENST00000623505 997 ntBASIC18.11■□□□□ 0.49
CDKL1Q00532 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKL1Q00532 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDKL1Q00532 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKL1Q00532 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDKL1Q00532 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDKL1Q00532 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL1Q00532 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL1Q00532 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CDKL1Q00532 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL1Q00532 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL1Q00532 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.1■□□□□ 0.49
CDKL1Q00532 KRT8P7-201ENST00000533003 1432 ntBASIC18.1■□□□□ 0.49
CDKL1Q00532 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.1■□□□□ 0.49
CDKL1Q00532 EGLN1P1-201ENST00000531623 762 ntBASIC18.1■□□□□ 0.49
CDKL1Q00532 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.1■□□□□ 0.49
CDKL1Q00532 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.1■□□□□ 0.49
CDKL1Q00532 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.1■□□□□ 0.49
CDKL1Q00532 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL1Q00532 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CDKL1Q00532 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL1Q00532 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL1Q00532 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL1Q00532 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDKL1Q00532 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDKL1Q00532 HOXB1-202ENST00000577092 1414 ntBASIC18.09■□□□□ 0.49
CDKL1Q00532 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL1Q00532 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL1Q00532 AC007663.1-201ENST00000438948 1240 ntBASIC18.09■□□□□ 0.49
CDKL1Q00532 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.09■□□□□ 0.49
CDKL1Q00532 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDKL1Q00532 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CDKL1Q00532 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.09■□□□□ 0.49
CDKL1Q00532 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL1Q00532 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms