Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ITGA8P53708 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ITGA8P53708 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.92■□□□□ 0.62
ITGA8P53708 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ITGA8P53708 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ITGA8P53708 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ITGA8P53708 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ITGA8P53708 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.91■□□□□ 0.62
ITGA8P53708 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ITGA8P53708 AC011506.1-201ENST00000474329 610 ntBASIC18.91■□□□□ 0.62
ITGA8P53708 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.91■□□□□ 0.62
ITGA8P53708 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ITGA8P53708 AC026271.3-201ENST00000571884 352 ntBASIC18.91■□□□□ 0.62
ITGA8P53708 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.91■□□□□ 0.62
ITGA8P53708 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ITGA8P53708 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.91■□□□□ 0.62
ITGA8P53708 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.91■□□□□ 0.62
ITGA8P53708 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.91■□□□□ 0.62
ITGA8P53708 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.91■□□□□ 0.62
ITGA8P53708 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ITGA8P53708 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ITGA8P53708 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ITGA8P53708 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.91■□□□□ 0.62
ITGA8P53708 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA8P53708 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.9■□□□□ 0.62
ITGA8P53708 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
ITGA8P53708 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.9■□□□□ 0.62
ITGA8P53708 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA8P53708 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ITGA8P53708 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA8P53708 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA8P53708 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA8P53708 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA8P53708 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA8P53708 MIR564-202ENST00000385049 94 ntBASIC18.9■□□□□ 0.62
ITGA8P53708 FAM201B-201ENST00000458407 597 ntBASIC18.9■□□□□ 0.62
ITGA8P53708 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ITGA8P53708 AC073648.6-201ENST00000641589 218 ntBASIC18.9■□□□□ 0.62
ITGA8P53708 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA8P53708 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.9■□□□□ 0.62
ITGA8P53708 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA8P53708 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA8P53708 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ITGA8P53708 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ITGA8P53708 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.9■□□□□ 0.62
ITGA8P53708 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ITGA8P53708 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ITGA8P53708 GMCL1P1-201ENST00000463439 1581 ntBASIC18.89■□□□□ 0.62
ITGA8P53708 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ITGA8P53708 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
ITGA8P53708 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ITGA8P53708 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 AC099343.3-201ENST00000605834 2503 ntBASIC18.89■□□□□ 0.61
ITGA8P53708 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ITGA8P53708 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.89■□□□□ 0.61
ITGA8P53708 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.89■□□□□ 0.61
ITGA8P53708 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 TMEM191A-211ENST00000637163 1067 ntBASIC18.89■□□□□ 0.61
ITGA8P53708 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.89■□□□□ 0.61
ITGA8P53708 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.89■□□□□ 0.61
ITGA8P53708 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ITGA8P53708 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
ITGA8P53708 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ITGA8P53708 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.88■□□□□ 0.61
ITGA8P53708 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA8P53708 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA8P53708 PHGDH-209ENST00000641074 1780 ntBASIC18.88■□□□□ 0.61
ITGA8P53708 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA8P53708 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA8P53708 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA8P53708 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA8P53708 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA8P53708 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA8P53708 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ITGA8P53708 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms