Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB28P51157 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB28P51157 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RAB28P51157 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RAB28P51157 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB28P51157 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB28P51157 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB28P51157 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.76■□□□□ 0.43
RAB28P51157 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB28P51157 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB28P51157 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB28P51157 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB28P51157 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB28P51157 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.75■□□□□ 0.43
RAB28P51157 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB28P51157 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB28P51157 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
RAB28P51157 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB28P51157 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB28P51157 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB28P51157 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB28P51157 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB28P51157 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
RAB28P51157 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAB28P51157 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAB28P51157 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB28P51157 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB28P51157 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB28P51157 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RAB28P51157 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB28P51157 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB28P51157 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB28P51157 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 SPDYE13P-201ENST00000445314 798 ntBASIC17.74■□□□□ 0.43
RAB28P51157 VENTXP5-201ENST00000523979 775 ntBASIC17.74■□□□□ 0.43
RAB28P51157 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB28P51157 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB28P51157 AL136038.3-201ENST00000561909 1096 ntBASIC17.74■□□□□ 0.43
RAB28P51157 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB28P51157 AC008687.5-201ENST00000593746 558 ntBASIC17.74■□□□□ 0.43
RAB28P51157 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RAB28P51157 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB28P51157 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RAB28P51157 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB28P51157 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB28P51157 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB28P51157 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB28P51157 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB28P51157 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB28P51157 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB28P51157 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB28P51157 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB28P51157 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB28P51157 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RAB28P51157 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB28P51157 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB28P51157 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB28P51157 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB28P51157 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB28P51157 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RAB28P51157 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB28P51157 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB28P51157 MIR662-201ENST00000384847 95 ntBASIC17.73■□□□□ 0.43
RAB28P51157 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAB28P51157 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB28P51157 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB28P51157 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB28P51157 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RAB28P51157 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB28P51157 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RAB28P51157 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms