Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.16■□□□□ 0.66
MMP13P45452 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.16■□□□□ 0.66
MMP13P45452 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MMP13P45452 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.16■□□□□ 0.66
MMP13P45452 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MMP13P45452 LINC00896-202ENST00000609602 2128 ntBASIC19.16■□□□□ 0.66
MMP13P45452 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
MMP13P45452 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MMP13P45452 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 RCC2P3-201ENST00000418112 1537 ntBASIC19.15■□□□□ 0.66
MMP13P45452 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.15■□□□□ 0.66
MMP13P45452 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 HEIH-201ENST00000623091 1652 ntBASIC19.15■□□□□ 0.66
MMP13P45452 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
MMP13P45452 AC087499.1-201ENST00000418141 1075 ntBASIC19.15■□□□□ 0.66
MMP13P45452 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.15■□□□□ 0.66
MMP13P45452 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 EGLN1P1-201ENST00000531623 762 ntBASIC19.15■□□□□ 0.66
MMP13P45452 AL353719.1-201ENST00000566847 864 ntBASIC19.15■□□□□ 0.66
MMP13P45452 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.15■□□□□ 0.66
MMP13P45452 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
MMP13P45452 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.15■□□□□ 0.66
MMP13P45452 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.15■□□□□ 0.66
MMP13P45452 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MMP13P45452 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP13P45452 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.14■□□□□ 0.66
MMP13P45452 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.14■□□□□ 0.66
MMP13P45452 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MMP13P45452 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MMP13P45452 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MMP13P45452 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MMP13P45452 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP13P45452 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP13P45452 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP13P45452 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
MMP13P45452 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.14■□□□□ 0.65
MMP13P45452 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.14■□□□□ 0.65
MMP13P45452 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP13P45452 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP13P45452 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP13P45452 AC073912.3-201ENST00000624414 853 ntBASIC19.14■□□□□ 0.65
MMP13P45452 AC068587.9-201ENST00000641814 219 ntBASIC19.14■□□□□ 0.65
MMP13P45452 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP13P45452 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.14■□□□□ 0.65
MMP13P45452 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MMP13P45452 AC092338.2-201ENST00000568827 1415 ntBASIC19.14■□□□□ 0.65
MMP13P45452 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP13P45452 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MMP13P45452 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
MMP13P45452 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.14■□□□□ 0.65
MMP13P45452 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.14■□□□□ 0.65
MMP13P45452 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.13■□□□□ 0.65
MMP13P45452 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
MMP13P45452 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
MMP13P45452 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 AC128688.1-201ENST00000487626 519 ntBASIC19.13■□□□□ 0.65
MMP13P45452 AP003041.3-201ENST00000527151 707 ntBASIC19.13■□□□□ 0.65
MMP13P45452 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.13■□□□□ 0.65
MMP13P45452 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.13■□□□□ 0.65
MMP13P45452 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.13■□□□□ 0.65
MMP13P45452 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
MMP13P45452 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.13■□□□□ 0.65
MMP13P45452 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 GPAT2P1-201ENST00000444924 1672 ntBASIC19.13■□□□□ 0.65
MMP13P45452 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.13■□□□□ 0.65
MMP13P45452 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
MMP13P45452 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.13■□□□□ 0.65
MMP13P45452 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
MMP13P45452 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MMP13P45452 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP13P45452 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.12■□□□□ 0.65
MMP13P45452 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.12■□□□□ 0.65
MMP13P45452 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms