Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP8P40818 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.07■□□□□ 0.8
USP8P40818 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP8P40818 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP8P40818 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP8P40818 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP8P40818 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP8P40818 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
USP8P40818 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.07■□□□□ 0.8
USP8P40818 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.07■□□□□ 0.8
USP8P40818 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP8P40818 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP8P40818 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP8P40818 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.07■□□□□ 0.8
USP8P40818 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
USP8P40818 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP8P40818 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.07■□□□□ 0.8
USP8P40818 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP8P40818 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.06■□□□□ 0.8
USP8P40818 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.06■□□□□ 0.8
USP8P40818 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
USP8P40818 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.06■□□□□ 0.8
USP8P40818 MIR1238-201ENST00000408483 83 ntBASIC20.06■□□□□ 0.8
USP8P40818 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
USP8P40818 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
USP8P40818 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.06■□□□□ 0.8
USP8P40818 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
USP8P40818 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.06■□□□□ 0.8
USP8P40818 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.06■□□□□ 0.8
USP8P40818 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.06■□□□□ 0.8
USP8P40818 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.06■□□□□ 0.8
USP8P40818 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP8P40818 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP8P40818 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.05■□□□□ 0.8
USP8P40818 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.05■□□□□ 0.8
USP8P40818 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.05■□□□□ 0.8
USP8P40818 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.05■□□□□ 0.8
USP8P40818 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.05■□□□□ 0.8
USP8P40818 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 AL355075.4-201ENST00000554988 638 ntBASIC20.05■□□□□ 0.8
USP8P40818 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 GPAT2P1-201ENST00000444924 1672 ntBASIC20.05■□□□□ 0.8
USP8P40818 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
USP8P40818 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
USP8P40818 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP8P40818 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP8P40818 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP8P40818 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.04■□□□□ 0.8
USP8P40818 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP8P40818 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
USP8P40818 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.04■□□□□ 0.8
USP8P40818 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.04■□□□□ 0.8
USP8P40818 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP8P40818 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
USP8P40818 AL023284.2-201ENST00000405850 579 ntBASIC20.04■□□□□ 0.8
USP8P40818 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.04■□□□□ 0.8
USP8P40818 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.04■□□□□ 0.8
USP8P40818 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.04■□□□□ 0.8
USP8P40818 AP005242.2-201ENST00000580065 1175 ntBASIC20.04■□□□□ 0.8
USP8P40818 MIR4497-201ENST00000583208 89 ntBASIC20.04■□□□□ 0.8
USP8P40818 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
USP8P40818 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP8P40818 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP8P40818 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP8P40818 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
USP8P40818 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.04■□□□□ 0.8
USP8P40818 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP8P40818 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
USP8P40818 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.04■□□□□ 0.8
USP8P40818 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
USP8P40818 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP8P40818 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 AL133373.2-201ENST00000623187 2828 ntBASIC20.03■□□□□ 0.8
USP8P40818 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms