Protein–RNA interactions for Protein: P40616

ARL1, ADP-ribosylation factor-like protein 1, humanhuman

Predicted RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARL1P40616 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.23■□□□□ 0.51
ARL1P40616 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ARL1P40616 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.23■□□□□ 0.51
ARL1P40616 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.23■□□□□ 0.51
ARL1P40616 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ARL1P40616 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 FAM197Y1-201ENST00000421178 764 ntBASIC18.23■□□□□ 0.51
ARL1P40616 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 AL158047.1-201ENST00000445918 881 ntBASIC18.23■□□□□ 0.51
ARL1P40616 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.23■□□□□ 0.51
ARL1P40616 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.23■□□□□ 0.51
ARL1P40616 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.23■□□□□ 0.51
ARL1P40616 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.23■□□□□ 0.51
ARL1P40616 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ARL1P40616 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.23■□□□□ 0.51
ARL1P40616 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.23■□□□□ 0.51
ARL1P40616 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 AC135050.7-201ENST00000624508 2218 ntBASIC18.23■□□□□ 0.51
ARL1P40616 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.23■□□□□ 0.51
ARL1P40616 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARL1P40616 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.23■□□□□ 0.51
ARL1P40616 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.23■□□□□ 0.51
ARL1P40616 AL499627.1-201ENST00000569373 2188 ntBASIC18.23■□□□□ 0.51
ARL1P40616 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARL1P40616 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ARL1P40616 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ARL1P40616 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.22■□□□□ 0.51
ARL1P40616 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARL1P40616 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARL1P40616 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
ARL1P40616 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARL1P40616 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARL1P40616 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.22■□□□□ 0.51
ARL1P40616 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ARL1P40616 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.22■□□□□ 0.51
ARL1P40616 AC142381.4-202ENST00000563973 229 ntBASIC18.22■□□□□ 0.51
ARL1P40616 MIR6786-201ENST00000616843 113 ntBASIC18.22■□□□□ 0.51
ARL1P40616 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.22■□□□□ 0.51
ARL1P40616 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARL1P40616 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
ARL1P40616 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ARL1P40616 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
ARL1P40616 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.22■□□□□ 0.51
ARL1P40616 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARL1P40616 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ARL1P40616 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.22■□□□□ 0.51
ARL1P40616 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.22■□□□□ 0.51
ARL1P40616 AL135905.2-201ENST00000584934 1404 ntBASIC18.22■□□□□ 0.51
ARL1P40616 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARL1P40616 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARL1P40616 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.22■□□□□ 0.51
ARL1P40616 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARL1P40616 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARL1P40616 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.22■□□□□ 0.51
ARL1P40616 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ARL1P40616 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ARL1P40616 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
ARL1P40616 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.21■□□□□ 0.51
ARL1P40616 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ARL1P40616 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ARL1P40616 LTB4R2-202ENST00000528054 3092 ntBASIC18.21■□□□□ 0.51
ARL1P40616 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
ARL1P40616 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.21■□□□□ 0.51
ARL1P40616 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
ARL1P40616 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.21■□□□□ 0.51
ARL1P40616 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.21■□□□□ 0.51
ARL1P40616 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.21■□□□□ 0.51
ARL1P40616 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.21■□□□□ 0.51
ARL1P40616 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.21■□□□□ 0.51
ARL1P40616 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
ARL1P40616 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 KRT8P3-201ENST00000519669 1449 ntBASIC18.21■□□□□ 0.51
ARL1P40616 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.21■□□□□ 0.51
ARL1P40616 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.21■□□□□ 0.51
ARL1P40616 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.21■□□□□ 0.51
ARL1P40616 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARL1P40616 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.21■□□□□ 0.51
ARL1P40616 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms