Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT20P35900 AP000525.1-201ENST00000608286 694 ntBASIC17.54■□□□□ 0.4
KRT20P35900 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
KRT20P35900 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT20P35900 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KRT20P35900 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT20P35900 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 AC096733.2-201ENST00000609937 1394 ntBASIC17.53■□□□□ 0.4
KRT20P35900 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KRT20P35900 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT20P35900 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT20P35900 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT20P35900 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT20P35900 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT20P35900 MIR1238-201ENST00000408483 83 ntBASIC17.53■□□□□ 0.4
KRT20P35900 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT20P35900 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT20P35900 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT20P35900 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KRT20P35900 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT20P35900 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT20P35900 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT20P35900 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT20P35900 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT20P35900 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT20P35900 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT20P35900 AC067852.2-201ENST00000590513 2313 ntBASIC17.53■□□□□ 0.4
KRT20P35900 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT20P35900 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT20P35900 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT20P35900 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT20P35900 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT20P35900 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT20P35900 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
KRT20P35900 AP005242.2-201ENST00000580065 1175 ntBASIC17.52■□□□□ 0.4
KRT20P35900 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT20P35900 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT20P35900 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT20P35900 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT20P35900 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
KRT20P35900 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT20P35900 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT20P35900 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
KRT20P35900 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.52■□□□□ 0.39
KRT20P35900 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
KRT20P35900 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT20P35900 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
KRT20P35900 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT20P35900 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
KRT20P35900 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT20P35900 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT20P35900 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.52■□□□□ 0.39
KRT20P35900 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT20P35900 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
KRT20P35900 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KRT20P35900 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT20P35900 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT20P35900 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT20P35900 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KRT20P35900 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
KRT20P35900 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT20P35900 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT20P35900 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.51■□□□□ 0.39
KRT20P35900 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.51■□□□□ 0.39
KRT20P35900 C2orf69P3-201ENST00000565542 1120 ntBASIC17.51■□□□□ 0.39
KRT20P35900 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.51■□□□□ 0.39
KRT20P35900 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
KRT20P35900 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT20P35900 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT20P35900 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT20P35900 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT20P35900 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.51■□□□□ 0.39
KRT20P35900 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KRT20P35900 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KRT20P35900 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT20P35900 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT20P35900 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms