Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 FLJ13224-201ENST00000313737 1514 ntBASIC14.34□□□□□ -0.11
RAB5AP20339 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB5AP20339 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB5AP20339 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB5AP20339 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB5AP20339 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB5AP20339 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB5AP20339 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB5AP20339 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB5AP20339 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
RAB5AP20339 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
RAB5AP20339 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RAB5AP20339 AGGF1P2-201ENST00000426656 2106 ntBASIC14.33□□□□□ -0.11
RAB5AP20339 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB5AP20339 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB5AP20339 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB5AP20339 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAB5AP20339 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 AC106886.4-201ENST00000623557 2502 ntBASIC14.33□□□□□ -0.12
RAB5AP20339 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB5AP20339 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB5AP20339 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB5AP20339 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB5AP20339 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 AC009299.2-201ENST00000482477 511 ntBASIC14.33□□□□□ -0.12
RAB5AP20339 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
RAB5AP20339 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB5AP20339 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB5AP20339 EEF1DP3-203ENST00000566025 782 ntBASIC14.33□□□□□ -0.12
RAB5AP20339 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB5AP20339 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5AP20339 FAM21FP-204ENST00000608637 956 ntBASIC14.33□□□□□ -0.12
RAB5AP20339 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5AP20339 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB5AP20339 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB5AP20339 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
RAB5AP20339 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB5AP20339 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5AP20339 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RAB5AP20339 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5AP20339 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5AP20339 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RAB5AP20339 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5AP20339 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB5AP20339 AC063926.3-201ENST00000624734 5658 ntBASIC14.32□□□□□ -0.12
RAB5AP20339 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5AP20339 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
RAB5AP20339 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5AP20339 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5AP20339 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RAB5AP20339 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB5AP20339 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB5AP20339 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB5AP20339 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RAB5AP20339 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.32□□□□□ -0.12
RAB5AP20339 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB5AP20339 PHGDH-210ENST00000641115 1638 ntBASIC14.32□□□□□ -0.12
RAB5AP20339 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB5AP20339 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5AP20339 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5AP20339 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RAB5AP20339 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB5AP20339 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAB5AP20339 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RAB5AP20339 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms