Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB4AP20338 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB4AP20338 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB4AP20338 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB4AP20338 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB4AP20338 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RAB4AP20338 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.12□□□□□ -0.15
RAB4AP20338 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB4AP20338 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.12□□□□□ -0.15
RAB4AP20338 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RAB4AP20338 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB4AP20338 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB4AP20338 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB4AP20338 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RAB4AP20338 AL162741.1-201ENST00000565563 1558 ntBASIC14.12□□□□□ -0.15
RAB4AP20338 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB4AP20338 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB4AP20338 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB4AP20338 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB4AP20338 CROCCP2-202ENST00000412962 2773 ntBASIC14.11□□□□□ -0.15
RAB4AP20338 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB4AP20338 AL645608.8-201ENST00000606034 2086 ntBASIC14.11□□□□□ -0.15
RAB4AP20338 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB4AP20338 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
RAB4AP20338 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB4AP20338 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RAB4AP20338 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RAB4AP20338 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 HLA-G-202ENST00000376815 851 ntBASIC14.11□□□□□ -0.15
RAB4AP20338 HLA-G-203ENST00000376818 1127 ntBASIC14.11□□□□□ -0.15
RAB4AP20338 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB4AP20338 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB4AP20338 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB4AP20338 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
RAB4AP20338 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.11□□□□□ -0.15
RAB4AP20338 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
RAB4AP20338 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB4AP20338 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB4AP20338 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB4AP20338 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RAB4AP20338 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB4AP20338 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAB4AP20338 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB4AP20338 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 FP475955.4-201ENST00000623131 1990 ntBASIC14.11□□□□□ -0.15
RAB4AP20338 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB4AP20338 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB4AP20338 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAB4AP20338 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RAB4AP20338 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 LINC00554-201ENST00000564841 3011 ntBASIC14.1□□□□□ -0.15
RAB4AP20338 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB4AP20338 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB4AP20338 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB4AP20338 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.1□□□□□ -0.15
RAB4AP20338 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms