Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A2P08123 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A2P08123 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A2P08123 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A2P08123 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A2P08123 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A2P08123 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A2P08123 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A2P08123 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A2P08123 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.14■□□□□ 0.82
COL1A2P08123 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A2P08123 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A2P08123 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A2P08123 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A2P08123 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.14■□□□□ 0.81
COL1A2P08123 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.14■□□□□ 0.81
COL1A2P08123 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.14■□□□□ 0.81
COL1A2P08123 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.14■□□□□ 0.81
COL1A2P08123 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.14■□□□□ 0.81
COL1A2P08123 LINC01711-201ENST00000598340 967 ntBASIC20.14■□□□□ 0.81
COL1A2P08123 AC009154.2-201ENST00000621177 724 ntBASIC20.14■□□□□ 0.81
COL1A2P08123 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A2P08123 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A2P08123 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A2P08123 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.14■□□□□ 0.81
COL1A2P08123 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL1A2P08123 LINC01126-201ENST00000623515 1646 ntBASIC20.14■□□□□ 0.81
COL1A2P08123 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A2P08123 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.14■□□□□ 0.81
COL1A2P08123 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.14■□□□□ 0.81
COL1A2P08123 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A2P08123 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.14■□□□□ 0.81
COL1A2P08123 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL1A2P08123 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
COL1A2P08123 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL1A2P08123 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.13■□□□□ 0.81
COL1A2P08123 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.13■□□□□ 0.81
COL1A2P08123 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A2P08123 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A2P08123 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A2P08123 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A2P08123 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.13■□□□□ 0.81
COL1A2P08123 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A2P08123 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.13■□□□□ 0.81
COL1A2P08123 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A2P08123 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.13■□□□□ 0.81
COL1A2P08123 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
COL1A2P08123 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A2P08123 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A2P08123 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.13■□□□□ 0.81
COL1A2P08123 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A2P08123 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.13■□□□□ 0.81
COL1A2P08123 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A2P08123 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
COL1A2P08123 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A2P08123 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.12■□□□□ 0.81
COL1A2P08123 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A2P08123 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A2P08123 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A2P08123 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A2P08123 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COL1A2P08123 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A2P08123 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.12■□□□□ 0.81
COL1A2P08123 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A2P08123 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.12■□□□□ 0.81
COL1A2P08123 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A2P08123 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.12■□□□□ 0.81
COL1A2P08123 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A2P08123 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COL1A2P08123 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.12■□□□□ 0.81
COL1A2P08123 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A2P08123 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A2P08123 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A2P08123 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.11■□□□□ 0.81
COL1A2P08123 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A2P08123 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
COL1A2P08123 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
COL1A2P08123 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.11■□□□□ 0.81
COL1A2P08123 POM121L3P-201ENST00000419331 1163 ntBASIC20.11■□□□□ 0.81
COL1A2P08123 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.11■□□□□ 0.81
COL1A2P08123 MINOS1P3-201ENST00000457048 203 ntBASIC20.11■□□□□ 0.81
COL1A2P08123 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.11■□□□□ 0.81
COL1A2P08123 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.11■□□□□ 0.81
COL1A2P08123 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.11■□□□□ 0.81
COL1A2P08123 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.11■□□□□ 0.81
COL1A2P08123 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.11■□□□□ 0.81
COL1A2P08123 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.11■□□□□ 0.81
COL1A2P08123 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A2P08123 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
COL1A2P08123 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A2P08123 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A2P08123 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL1A2P08123 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COL1A2P08123 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A2P08123 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A2P08123 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A2P08123 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A2P08123 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.1■□□□□ 0.81
COL1A2P08123 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.1■□□□□ 0.81
COL1A2P08123 KRT16P4-201ENST00000453883 522 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms