Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGA12O60330 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA12O60330 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA12O60330 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 AC009078.2-202ENST00000463353 338 ntBASIC18.24■□□□□ 0.51
PCDHGA12O60330 KRT18P31-201ENST00000506277 1292 ntBASIC18.24■□□□□ 0.51
PCDHGA12O60330 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA12O60330 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA12O60330 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 KRT18P23-201ENST00000435622 1283 ntBASIC18.23■□□□□ 0.51
PCDHGA12O60330 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 AC010240.3-201ENST00000607688 395 ntBASIC18.23■□□□□ 0.51
PCDHGA12O60330 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 Z83836.1-201ENST00000624605 1642 ntBASIC18.23■□□□□ 0.51
PCDHGA12O60330 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA12O60330 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA12O60330 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA12O60330 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGA12O60330 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA12O60330 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.22■□□□□ 0.51
PCDHGA12O60330 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 FOSL1P1-201ENST00000511041 816 ntBASIC18.22■□□□□ 0.51
PCDHGA12O60330 AC106795.1-205ENST00000512851 1056 ntBASIC18.22■□□□□ 0.51
PCDHGA12O60330 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA12O60330 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGA12O60330 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA12O60330 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PCDHGA12O60330 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms