Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.65■□□□□ 0.42
NDUFS4O43181 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.65■□□□□ 0.42
NDUFS4O43181 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.65■□□□□ 0.42
NDUFS4O43181 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NDUFS4O43181 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
NDUFS4O43181 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.65■□□□□ 0.42
NDUFS4O43181 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.65■□□□□ 0.42
NDUFS4O43181 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.65■□□□□ 0.42
NDUFS4O43181 AL441883.1-201ENST00000566170 1045 ntBASIC17.65■□□□□ 0.42
NDUFS4O43181 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.65■□□□□ 0.42
NDUFS4O43181 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.65■□□□□ 0.42
NDUFS4O43181 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NDUFS4O43181 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NDUFS4O43181 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
NDUFS4O43181 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NDUFS4O43181 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS4O43181 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NDUFS4O43181 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NDUFS4O43181 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.64■□□□□ 0.41
NDUFS4O43181 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.64■□□□□ 0.41
NDUFS4O43181 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
NDUFS4O43181 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.64■□□□□ 0.41
NDUFS4O43181 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS4O43181 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS4O43181 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.64■□□□□ 0.41
NDUFS4O43181 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS4O43181 AK4P3-201ENST00000418260 669 ntBASIC17.64■□□□□ 0.41
NDUFS4O43181 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS4O43181 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.64■□□□□ 0.41
NDUFS4O43181 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
NDUFS4O43181 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.64■□□□□ 0.41
NDUFS4O43181 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.64■□□□□ 0.41
NDUFS4O43181 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.64■□□□□ 0.41
NDUFS4O43181 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
NDUFS4O43181 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS4O43181 AC010240.3-201ENST00000607688 395 ntBASIC17.64■□□□□ 0.41
NDUFS4O43181 AC011558.1-201ENST00000623459 338 ntBASIC17.64■□□□□ 0.41
NDUFS4O43181 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS4O43181 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.64■□□□□ 0.41
NDUFS4O43181 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS4O43181 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.64■□□□□ 0.41
NDUFS4O43181 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS4O43181 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
NDUFS4O43181 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.64■□□□□ 0.41
NDUFS4O43181 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NDUFS4O43181 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.63■□□□□ 0.41
NDUFS4O43181 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NDUFS4O43181 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
NDUFS4O43181 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.63■□□□□ 0.41
NDUFS4O43181 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NDUFS4O43181 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
NDUFS4O43181 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.63■□□□□ 0.41
NDUFS4O43181 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.63■□□□□ 0.41
NDUFS4O43181 FAM210CP-201ENST00000445714 574 ntBASIC17.63■□□□□ 0.41
NDUFS4O43181 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.63■□□□□ 0.41
NDUFS4O43181 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.63■□□□□ 0.41
NDUFS4O43181 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NDUFS4O43181 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.63■□□□□ 0.41
NDUFS4O43181 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NDUFS4O43181 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.63■□□□□ 0.41
NDUFS4O43181 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.63■□□□□ 0.41
NDUFS4O43181 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.63■□□□□ 0.41
NDUFS4O43181 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NDUFS4O43181 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.63■□□□□ 0.41
NDUFS4O43181 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFS4O43181 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.62■□□□□ 0.41
NDUFS4O43181 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.62■□□□□ 0.41
NDUFS4O43181 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 AL163051.1-201ENST00000569214 1512 ntBASIC17.62■□□□□ 0.41
NDUFS4O43181 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFS4O43181 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
NDUFS4O43181 RNF165-205ENST00000588679 2904 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms