Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 UPK3BP1-201ENST00000428678 509 ntBASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC079602.3-201ENST00000623931 403 ntBASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 HTR7P1-202ENST00000624664 4411 ntBASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 KRT8P50-201ENST00000562022 1438 ntBASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 AP000593.1-201ENST00000393668 712 ntBASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 AL645929.1-201ENST00000420084 975 ntBASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 MIR3180-4-201ENST00000582223 153 ntBASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
IGHV4-28A0A0C4DH34 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IGHV4-28A0A0C4DH34 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms