Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AC098590.1-201ENST00000468126 897 ntBASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 C1QL1P1-201ENST00000568105 661 ntBASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AC139713.2-201ENST00000641328 2723 ntBASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 HTR7P1-201ENST00000538670 1336 ntBASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ANO7L1-203ENST00000602586 1720 ntBASIC13.08□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms