Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS1Q9Y6A9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS1Q9Y6A9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS1Q9Y6A9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS1Q9Y6A9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS1Q9Y6A9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS1Q9Y6A9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPCS1Q9Y6A9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.26■□□□□ 0.35
SPCS1Q9Y6A9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SPCS1Q9Y6A9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.25■□□□□ 0.35
SPCS1Q9Y6A9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS1Q9Y6A9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPCS1Q9Y6A9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.25■□□□□ 0.35
SPCS1Q9Y6A9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPCS1Q9Y6A9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SPCS1Q9Y6A9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.24■□□□□ 0.35
SPCS1Q9Y6A9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPCS1Q9Y6A9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPCS1Q9Y6A9 AL135925.1-201ENST00000605920 1701 ntBASIC17.24■□□□□ 0.35
SPCS1Q9Y6A9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.24■□□□□ 0.35
SPCS1Q9Y6A9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS1Q9Y6A9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS1Q9Y6A9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.23■□□□□ 0.35
SPCS1Q9Y6A9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS1Q9Y6A9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SPCS1Q9Y6A9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS1Q9Y6A9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS1Q9Y6A9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SPCS1Q9Y6A9 PKD1P6-201ENST00000343738 4769 ntBASIC17.22■□□□□ 0.35
SPCS1Q9Y6A9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS1Q9Y6A9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS1Q9Y6A9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS1Q9Y6A9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SPCS1Q9Y6A9 AC068473.5-201ENST00000616428 2072 ntBASIC17.21■□□□□ 0.35
SPCS1Q9Y6A9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS1Q9Y6A9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS1Q9Y6A9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.21■□□□□ 0.35
SPCS1Q9Y6A9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS1Q9Y6A9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS1Q9Y6A9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SPCS1Q9Y6A9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS1Q9Y6A9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS1Q9Y6A9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS1Q9Y6A9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS1Q9Y6A9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS1Q9Y6A9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS1Q9Y6A9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS1Q9Y6A9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.2■□□□□ 0.34
SPCS1Q9Y6A9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS1Q9Y6A9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS1Q9Y6A9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS1Q9Y6A9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS1Q9Y6A9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS1Q9Y6A9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.18■□□□□ 0.34
SPCS1Q9Y6A9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS1Q9Y6A9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.18■□□□□ 0.34
SPCS1Q9Y6A9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS1Q9Y6A9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS1Q9Y6A9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS1Q9Y6A9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS1Q9Y6A9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS1Q9Y6A9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS1Q9Y6A9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SPCS1Q9Y6A9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS1Q9Y6A9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SPCS1Q9Y6A9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.17■□□□□ 0.34
SPCS1Q9Y6A9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS1Q9Y6A9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC17.16■□□□□ 0.34
SPCS1Q9Y6A9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS1Q9Y6A9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS1Q9Y6A9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS1Q9Y6A9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS1Q9Y6A9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS1Q9Y6A9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS1Q9Y6A9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.14■□□□□ 0.33
SPCS1Q9Y6A9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS1Q9Y6A9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS1Q9Y6A9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS1Q9Y6A9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS1Q9Y6A9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS1Q9Y6A9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS1Q9Y6A9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS1Q9Y6A9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS1Q9Y6A9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS1Q9Y6A9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SPCS1Q9Y6A9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS1Q9Y6A9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS1Q9Y6A9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms