Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGB1Q9Y5G3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
PCDHGB1Q9Y5G3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHGB1Q9Y5G3 AC092803.2-201ENST00000564287 1899 ntBASIC22.71■■□□□ 1.23
PCDHGB1Q9Y5G3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGB1Q9Y5G3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
PCDHGB1Q9Y5G3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGB1Q9Y5G3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
PCDHGB1Q9Y5G3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDHGB1Q9Y5G3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB1Q9Y5G3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB1Q9Y5G3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB1Q9Y5G3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.69■■□□□ 1.22
PCDHGB1Q9Y5G3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB1Q9Y5G3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDHGB1Q9Y5G3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
PCDHGB1Q9Y5G3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGB1Q9Y5G3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGB1Q9Y5G3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGB1Q9Y5G3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGB1Q9Y5G3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGB1Q9Y5G3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB1Q9Y5G3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB1Q9Y5G3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB1Q9Y5G3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PCDHGB1Q9Y5G3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PCDHGB1Q9Y5G3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB1Q9Y5G3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB1Q9Y5G3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHGB1Q9Y5G3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PCDHGB1Q9Y5G3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB1Q9Y5G3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGB1Q9Y5G3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCDHGB1Q9Y5G3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHGB1Q9Y5G3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB1Q9Y5G3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.65■■□□□ 1.22
PCDHGB1Q9Y5G3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.22
PCDHGB1Q9Y5G3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.64■■□□□ 1.22
PCDHGB1Q9Y5G3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGB1Q9Y5G3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGB1Q9Y5G3 AC018358.1-201ENST00000631079 1402 ntBASIC22.64■■□□□ 1.21
PCDHGB1Q9Y5G3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB1Q9Y5G3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB1Q9Y5G3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDHGB1Q9Y5G3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB1Q9Y5G3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PCDHGB1Q9Y5G3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB1Q9Y5G3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB1Q9Y5G3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB1Q9Y5G3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB1Q9Y5G3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB1Q9Y5G3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDHGB1Q9Y5G3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB1Q9Y5G3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB1Q9Y5G3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB1Q9Y5G3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB1Q9Y5G3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB1Q9Y5G3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PCDHGB1Q9Y5G3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB1Q9Y5G3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB1Q9Y5G3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB1Q9Y5G3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB1Q9Y5G3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.61■■□□□ 1.21
PCDHGB1Q9Y5G3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB1Q9Y5G3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHGB1Q9Y5G3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGB1Q9Y5G3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHGB1Q9Y5G3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGB1Q9Y5G3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGB1Q9Y5G3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.6■■□□□ 1.21
PCDHGB1Q9Y5G3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGB1Q9Y5G3 AL391121.1-201ENST00000607967 1349 ntBASIC22.59■■□□□ 1.21
PCDHGB1Q9Y5G3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PCDHGB1Q9Y5G3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB1Q9Y5G3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PCDHGB1Q9Y5G3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB1Q9Y5G3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGB1Q9Y5G3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGB1Q9Y5G3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHGB1Q9Y5G3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.58■■□□□ 1.21
PCDHGB1Q9Y5G3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGB1Q9Y5G3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHGB1Q9Y5G3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB1Q9Y5G3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGB1Q9Y5G3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB1Q9Y5G3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGB1Q9Y5G3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGB1Q9Y5G3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGB1Q9Y5G3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHGB1Q9Y5G3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGB1Q9Y5G3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB1Q9Y5G3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB1Q9Y5G3 ERN1-208ENST00000606895 2068 ntBASIC22.54■■□□□ 1.2
PCDHGB1Q9Y5G3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHGB1Q9Y5G3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB1Q9Y5G3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB1Q9Y5G3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB1Q9Y5G3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDHGB1Q9Y5G3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB1Q9Y5G3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms