Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM5Q9Y4Y9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM5Q9Y4Y9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
LSM5Q9Y4Y9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM5Q9Y4Y9 DUSP8P4-201ENST00000399538 1761 ntBASIC20.4■□□□□ 0.86
LSM5Q9Y4Y9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM5Q9Y4Y9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LSM5Q9Y4Y9 AC092803.2-201ENST00000564287 1899 ntBASIC20.4■□□□□ 0.86
LSM5Q9Y4Y9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.4■□□□□ 0.86
LSM5Q9Y4Y9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
LSM5Q9Y4Y9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LSM5Q9Y4Y9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSM5Q9Y4Y9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
LSM5Q9Y4Y9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSM5Q9Y4Y9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.39■□□□□ 0.85
LSM5Q9Y4Y9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM5Q9Y4Y9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM5Q9Y4Y9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
LSM5Q9Y4Y9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LSM5Q9Y4Y9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.38■□□□□ 0.85
LSM5Q9Y4Y9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM5Q9Y4Y9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM5Q9Y4Y9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM5Q9Y4Y9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSM5Q9Y4Y9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
LSM5Q9Y4Y9 AC018358.1-201ENST00000631079 1402 ntBASIC20.37■□□□□ 0.85
LSM5Q9Y4Y9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSM5Q9Y4Y9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.37■□□□□ 0.85
LSM5Q9Y4Y9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSM5Q9Y4Y9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM5Q9Y4Y9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM5Q9Y4Y9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.37■□□□□ 0.85
LSM5Q9Y4Y9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
LSM5Q9Y4Y9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LSM5Q9Y4Y9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSM5Q9Y4Y9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.36■□□□□ 0.85
LSM5Q9Y4Y9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM5Q9Y4Y9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LSM5Q9Y4Y9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LSM5Q9Y4Y9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM5Q9Y4Y9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LSM5Q9Y4Y9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM5Q9Y4Y9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM5Q9Y4Y9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.35■□□□□ 0.85
LSM5Q9Y4Y9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM5Q9Y4Y9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM5Q9Y4Y9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LSM5Q9Y4Y9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LSM5Q9Y4Y9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM5Q9Y4Y9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.34■□□□□ 0.85
LSM5Q9Y4Y9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM5Q9Y4Y9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM5Q9Y4Y9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM5Q9Y4Y9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LSM5Q9Y4Y9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LSM5Q9Y4Y9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSM5Q9Y4Y9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM5Q9Y4Y9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM5Q9Y4Y9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM5Q9Y4Y9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.32■□□□□ 0.84
LSM5Q9Y4Y9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LSM5Q9Y4Y9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM5Q9Y4Y9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSM5Q9Y4Y9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM5Q9Y4Y9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM5Q9Y4Y9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM5Q9Y4Y9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM5Q9Y4Y9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.31■□□□□ 0.84
LSM5Q9Y4Y9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LSM5Q9Y4Y9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM5Q9Y4Y9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.3■□□□□ 0.84
LSM5Q9Y4Y9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.3■□□□□ 0.84
LSM5Q9Y4Y9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LSM5Q9Y4Y9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.3■□□□□ 0.84
LSM5Q9Y4Y9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LSM5Q9Y4Y9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.3■□□□□ 0.84
LSM5Q9Y4Y9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSM5Q9Y4Y9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSM5Q9Y4Y9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.29■□□□□ 0.84
LSM5Q9Y4Y9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.29■□□□□ 0.84
LSM5Q9Y4Y9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.29■□□□□ 0.84
LSM5Q9Y4Y9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSM5Q9Y4Y9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSM5Q9Y4Y9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSM5Q9Y4Y9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSM5Q9Y4Y9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.28■□□□□ 0.84
LSM5Q9Y4Y9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSM5Q9Y4Y9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
LSM5Q9Y4Y9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LSM5Q9Y4Y9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM5Q9Y4Y9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LSM5Q9Y4Y9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM5Q9Y4Y9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM5Q9Y4Y9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM5Q9Y4Y9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LSM5Q9Y4Y9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM5Q9Y4Y9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM5Q9Y4Y9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.24■□□□□ 0.83
LSM5Q9Y4Y9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.24■□□□□ 0.83
LSM5Q9Y4Y9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms