Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHA7Q9UN72 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHA7Q9UN72 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.38■■■□□ 2.13
PCDHA7Q9UN72 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHA7Q9UN72 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
PCDHA7Q9UN72 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.35■■■□□ 2.13
PCDHA7Q9UN72 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA7Q9UN72 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.34■■■□□ 2.13
PCDHA7Q9UN72 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.34■■■□□ 2.13
PCDHA7Q9UN72 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHA7Q9UN72 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.33■■■□□ 2.13
PCDHA7Q9UN72 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.33■■■□□ 2.13
PCDHA7Q9UN72 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.33■■■□□ 2.13
PCDHA7Q9UN72 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.33■■■□□ 2.12
PCDHA7Q9UN72 AP004609.3-201ENST00000610705 1884 ntBASIC28.32■■■□□ 2.12
PCDHA7Q9UN72 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.32■■■□□ 2.12
PCDHA7Q9UN72 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHA7Q9UN72 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHA7Q9UN72 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.31■■■□□ 2.12
PCDHA7Q9UN72 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.3■■■□□ 2.12
PCDHA7Q9UN72 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
PCDHA7Q9UN72 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHA7Q9UN72 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
PCDHA7Q9UN72 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHA7Q9UN72 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHA7Q9UN72 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.28■■■□□ 2.12
PCDHA7Q9UN72 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.28■■■□□ 2.12
PCDHA7Q9UN72 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
PCDHA7Q9UN72 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHA7Q9UN72 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHA7Q9UN72 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHA7Q9UN72 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.27■■■□□ 2.12
PCDHA7Q9UN72 RPS2P35-201ENST00000443417 897 ntBASIC28.26■■■□□ 2.11
PCDHA7Q9UN72 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.26■■■□□ 2.11
PCDHA7Q9UN72 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHA7Q9UN72 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHA7Q9UN72 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHA7Q9UN72 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHA7Q9UN72 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHA7Q9UN72 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHA7Q9UN72 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHA7Q9UN72 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.24■■■□□ 2.11
PCDHA7Q9UN72 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHA7Q9UN72 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHA7Q9UN72 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHA7Q9UN72 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHA7Q9UN72 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.23■■■□□ 2.11
PCDHA7Q9UN72 WHAMMP3-201ENST00000611636 1609 ntBASIC28.22■■■□□ 2.11
PCDHA7Q9UN72 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.22■■■□□ 2.11
PCDHA7Q9UN72 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHA7Q9UN72 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.22■■■□□ 2.11
PCDHA7Q9UN72 AC145676.1-201ENST00000514988 2004 ntBASIC28.21■■■□□ 2.11
PCDHA7Q9UN72 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.21■■■□□ 2.11
PCDHA7Q9UN72 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHA7Q9UN72 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHA7Q9UN72 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHA7Q9UN72 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHA7Q9UN72 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.2■■■□□ 2.1
PCDHA7Q9UN72 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PCDHA7Q9UN72 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHA7Q9UN72 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
PCDHA7Q9UN72 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHA7Q9UN72 AC142472.1-201ENST00000612013 1741 ntBASIC28.18■■■□□ 2.1
PCDHA7Q9UN72 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHA7Q9UN72 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHA7Q9UN72 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHA7Q9UN72 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHA7Q9UN72 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.17■■■□□ 2.1
PCDHA7Q9UN72 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.16■■■□□ 2.1
PCDHA7Q9UN72 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.16■■■□□ 2.1
PCDHA7Q9UN72 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHA7Q9UN72 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHA7Q9UN72 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHA7Q9UN72 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHA7Q9UN72 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHA7Q9UN72 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHA7Q9UN72 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
PCDHA7Q9UN72 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.15■■■□□ 2.1
PCDHA7Q9UN72 AC092803.2-201ENST00000564287 1899 ntBASIC28.15■■■□□ 2.1
PCDHA7Q9UN72 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHA7Q9UN72 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
PCDHA7Q9UN72 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PCDHA7Q9UN72 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.09
PCDHA7Q9UN72 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PCDHA7Q9UN72 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.13■■■□□ 2.09
PCDHA7Q9UN72 LINC01971-201ENST00000617888 1048 ntBASIC28.13■■■□□ 2.09
PCDHA7Q9UN72 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHA7Q9UN72 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC28.13■■■□□ 2.09
PCDHA7Q9UN72 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHA7Q9UN72 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.12■■■□□ 2.09
PCDHA7Q9UN72 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.12■■■□□ 2.09
PCDHA7Q9UN72 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.12■■■□□ 2.09
PCDHA7Q9UN72 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHA7Q9UN72 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
PCDHA7Q9UN72 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
PCDHA7Q9UN72 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.11■■■□□ 2.09
PCDHA7Q9UN72 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.1■■■□□ 2.09
PCDHA7Q9UN72 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHA7Q9UN72 DUSP8P4-201ENST00000399538 1761 ntBASIC28.1■■■□□ 2.09
PCDHA7Q9UN72 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms