Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RBFOX1Q9NWB1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RBFOX1Q9NWB1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RBFOX1Q9NWB1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RBFOX1Q9NWB1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
RBFOX1Q9NWB1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RBFOX1Q9NWB1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.83■■□□□ 1.09
RBFOX1Q9NWB1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RBFOX1Q9NWB1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RBFOX1Q9NWB1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RBFOX1Q9NWB1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RBFOX1Q9NWB1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.83■■□□□ 1.08
RBFOX1Q9NWB1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
RBFOX1Q9NWB1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 DUX4L28-201ENST00000623687 678 ntBASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBFOX1Q9NWB1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBFOX1Q9NWB1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBFOX1Q9NWB1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBFOX1Q9NWB1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBFOX1Q9NWB1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.8■■□□□ 1.08
RBFOX1Q9NWB1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBFOX1Q9NWB1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RBFOX1Q9NWB1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.78■■□□□ 1.08
RBFOX1Q9NWB1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RBFOX1Q9NWB1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RBFOX1Q9NWB1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RBFOX1Q9NWB1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
RBFOX1Q9NWB1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RBFOX1Q9NWB1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RBFOX1Q9NWB1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RBFOX1Q9NWB1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RBFOX1Q9NWB1 AC108673.1-201ENST00000510422 1159 ntBASIC21.75■■□□□ 1.07
RBFOX1Q9NWB1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.75■■□□□ 1.07
RBFOX1Q9NWB1 MIR3665-201ENST00000578708 105 ntBASIC21.75■■□□□ 1.07
RBFOX1Q9NWB1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RBFOX1Q9NWB1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
RBFOX1Q9NWB1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 AC100797.4-201ENST00000631653 1827 ntBASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 MIR6090-201ENST00000622481 60 ntBASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.73■■□□□ 1.07
RBFOX1Q9NWB1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBFOX1Q9NWB1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.73■■□□□ 1.07
RBFOX1Q9NWB1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBFOX1Q9NWB1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.73■■□□□ 1.07
RBFOX1Q9NWB1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBFOX1Q9NWB1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.72■■□□□ 1.07
RBFOX1Q9NWB1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RBFOX1Q9NWB1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBFOX1Q9NWB1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 AP006261.1-201ENST00000584783 668 ntBASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RBFOX1Q9NWB1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RBFOX1Q9NWB1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.7■■□□□ 1.06
RBFOX1Q9NWB1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.7■■□□□ 1.06
RBFOX1Q9NWB1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RBFOX1Q9NWB1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
RBFOX1Q9NWB1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.69■■□□□ 1.06
RBFOX1Q9NWB1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RBFOX1Q9NWB1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RBFOX1Q9NWB1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBFOX1Q9NWB1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBFOX1Q9NWB1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.68■■□□□ 1.06
RBFOX1Q9NWB1 DUSP8P4-201ENST00000399538 1761 ntBASIC21.68■■□□□ 1.06
RBFOX1Q9NWB1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RBFOX1Q9NWB1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms