Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
LRTM1Q9HBL6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LRTM1Q9HBL6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.93■■□□□ 1.42
LRTM1Q9HBL6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
LRTM1Q9HBL6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRTM1Q9HBL6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LRTM1Q9HBL6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LRTM1Q9HBL6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LRTM1Q9HBL6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.91■■□□□ 1.42
LRTM1Q9HBL6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
LRTM1Q9HBL6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.91■■□□□ 1.42
LRTM1Q9HBL6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.91■■□□□ 1.42
LRTM1Q9HBL6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LRTM1Q9HBL6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.91■■□□□ 1.42
LRTM1Q9HBL6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LRTM1Q9HBL6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRTM1Q9HBL6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRTM1Q9HBL6 AL449106.1-201ENST00000608517 1980 ntBASIC23.9■■□□□ 1.42
LRTM1Q9HBL6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LRTM1Q9HBL6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.89■■□□□ 1.42
LRTM1Q9HBL6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
LRTM1Q9HBL6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
LRTM1Q9HBL6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LRTM1Q9HBL6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRTM1Q9HBL6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LRTM1Q9HBL6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.88■■□□□ 1.41
LRTM1Q9HBL6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
LRTM1Q9HBL6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRTM1Q9HBL6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.87■■□□□ 1.41
LRTM1Q9HBL6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.87■■□□□ 1.41
LRTM1Q9HBL6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.87■■□□□ 1.41
LRTM1Q9HBL6 AC091060.1-201ENST00000623524 1766 ntBASIC23.87■■□□□ 1.41
LRTM1Q9HBL6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRTM1Q9HBL6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.86■■□□□ 1.41
LRTM1Q9HBL6 AP004609.3-201ENST00000610705 1884 ntBASIC23.85■■□□□ 1.41
LRTM1Q9HBL6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LRTM1Q9HBL6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.85■■□□□ 1.41
LRTM1Q9HBL6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.85■■□□□ 1.41
LRTM1Q9HBL6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.84■■□□□ 1.41
LRTM1Q9HBL6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRTM1Q9HBL6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.84■■□□□ 1.41
LRTM1Q9HBL6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LRTM1Q9HBL6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.82■■□□□ 1.4
LRTM1Q9HBL6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.81■■□□□ 1.4
LRTM1Q9HBL6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRTM1Q9HBL6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRTM1Q9HBL6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
LRTM1Q9HBL6 RPS2P35-201ENST00000443417 897 ntBASIC23.8■■□□□ 1.4
LRTM1Q9HBL6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
LRTM1Q9HBL6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRTM1Q9HBL6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRTM1Q9HBL6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.8■■□□□ 1.4
LRTM1Q9HBL6 WHAMMP3-201ENST00000611636 1609 ntBASIC23.8■■□□□ 1.4
LRTM1Q9HBL6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.79■■□□□ 1.4
LRTM1Q9HBL6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.79■■□□□ 1.4
LRTM1Q9HBL6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRTM1Q9HBL6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRTM1Q9HBL6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
LRTM1Q9HBL6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRTM1Q9HBL6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRTM1Q9HBL6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
LRTM1Q9HBL6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.77■■□□□ 1.4
LRTM1Q9HBL6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.77■■□□□ 1.4
LRTM1Q9HBL6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRTM1Q9HBL6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
LRTM1Q9HBL6 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.76■■□□□ 1.39
LRTM1Q9HBL6 AC145676.1-201ENST00000514988 2004 ntBASIC23.76■■□□□ 1.39
LRTM1Q9HBL6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
LRTM1Q9HBL6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.75■■□□□ 1.39
LRTM1Q9HBL6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.75■■□□□ 1.39
LRTM1Q9HBL6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LRTM1Q9HBL6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRTM1Q9HBL6 AC142472.1-201ENST00000612013 1741 ntBASIC23.75■■□□□ 1.39
LRTM1Q9HBL6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LRTM1Q9HBL6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.74■■□□□ 1.39
LRTM1Q9HBL6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LRTM1Q9HBL6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LRTM1Q9HBL6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.74■■□□□ 1.39
LRTM1Q9HBL6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.74■■□□□ 1.39
LRTM1Q9HBL6 LINC01971-201ENST00000617888 1048 ntBASIC23.74■■□□□ 1.39
LRTM1Q9HBL6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRTM1Q9HBL6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRTM1Q9HBL6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRTM1Q9HBL6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRTM1Q9HBL6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.72■■□□□ 1.39
LRTM1Q9HBL6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRTM1Q9HBL6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRTM1Q9HBL6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRTM1Q9HBL6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRTM1Q9HBL6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRTM1Q9HBL6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
LRTM1Q9HBL6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.7■■□□□ 1.38
LRTM1Q9HBL6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRTM1Q9HBL6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRTM1Q9HBL6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRTM1Q9HBL6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRTM1Q9HBL6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRTM1Q9HBL6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRTM1Q9HBL6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRTM1Q9HBL6 AC092803.2-201ENST00000564287 1899 ntBASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms