Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CPNE1Q99829 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CPNE1Q99829 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CPNE1Q99829 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CPNE1Q99829 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPNE1Q99829 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPNE1Q99829 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.9■■□□□ 1.58
CPNE1Q99829 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.9■■□□□ 1.58
CPNE1Q99829 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CPNE1Q99829 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CPNE1Q99829 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CPNE1Q99829 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CPNE1Q99829 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CPNE1Q99829 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CPNE1Q99829 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CPNE1Q99829 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CPNE1Q99829 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CPNE1Q99829 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CPNE1Q99829 AP004609.3-201ENST00000610705 1884 ntBASIC24.87■■□□□ 1.57
CPNE1Q99829 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CPNE1Q99829 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.86■■□□□ 1.57
CPNE1Q99829 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPNE1Q99829 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPNE1Q99829 AC021231.2-201ENST00000594613 730 ntBASIC24.86■■□□□ 1.57
CPNE1Q99829 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.86■■□□□ 1.57
CPNE1Q99829 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.85■■□□□ 1.57
CPNE1Q99829 AC145676.1-201ENST00000514988 2004 ntBASIC24.85■■□□□ 1.57
CPNE1Q99829 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.85■■□□□ 1.57
CPNE1Q99829 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CPNE1Q99829 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
CPNE1Q99829 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
CPNE1Q99829 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CPNE1Q99829 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.84■■□□□ 1.57
CPNE1Q99829 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.84■■□□□ 1.57
CPNE1Q99829 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CPNE1Q99829 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CPNE1Q99829 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CPNE1Q99829 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.83■■□□□ 1.56
CPNE1Q99829 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CPNE1Q99829 DUX4L29-201ENST00000425409 679 ntBASIC24.82■■□□□ 1.56
CPNE1Q99829 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.82■■□□□ 1.56
CPNE1Q99829 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.82■■□□□ 1.56
CPNE1Q99829 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPNE1Q99829 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.81■■□□□ 1.56
CPNE1Q99829 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CPNE1Q99829 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CPNE1Q99829 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CPNE1Q99829 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
CPNE1Q99829 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.8■■□□□ 1.56
CPNE1Q99829 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CPNE1Q99829 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.79■■□□□ 1.56
CPNE1Q99829 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.79■■□□□ 1.56
CPNE1Q99829 WHAMMP3-201ENST00000611636 1609 ntBASIC24.79■■□□□ 1.56
CPNE1Q99829 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPNE1Q99829 AC142472.1-201ENST00000612013 1741 ntBASIC24.78■■□□□ 1.56
CPNE1Q99829 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CPNE1Q99829 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.76■■□□□ 1.55
CPNE1Q99829 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CPNE1Q99829 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CPNE1Q99829 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CPNE1Q99829 AC092803.2-201ENST00000564287 1899 ntBASIC24.75■■□□□ 1.55
CPNE1Q99829 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CPNE1Q99829 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.75■■□□□ 1.55
CPNE1Q99829 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.75■■□□□ 1.55
CPNE1Q99829 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CPNE1Q99829 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CPNE1Q99829 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CPNE1Q99829 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPNE1Q99829 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPNE1Q99829 DUSP8P4-201ENST00000399538 1761 ntBASIC24.73■■□□□ 1.55
CPNE1Q99829 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPNE1Q99829 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
CPNE1Q99829 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.73■■□□□ 1.55
CPNE1Q99829 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPNE1Q99829 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPNE1Q99829 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPNE1Q99829 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPNE1Q99829 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.71■■□□□ 1.55
CPNE1Q99829 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CPNE1Q99829 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CPNE1Q99829 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CPNE1Q99829 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.7■■□□□ 1.54
CPNE1Q99829 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CPNE1Q99829 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CPNE1Q99829 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CPNE1Q99829 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CPNE1Q99829 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.69■■□□□ 1.54
CPNE1Q99829 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.69■■□□□ 1.54
CPNE1Q99829 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
CPNE1Q99829 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CPNE1Q99829 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.67■■□□□ 1.54
CPNE1Q99829 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CPNE1Q99829 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CPNE1Q99829 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CPNE1Q99829 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CPNE1Q99829 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.67■■□□□ 1.54
CPNE1Q99829 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.67■■□□□ 1.54
CPNE1Q99829 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CPNE1Q99829 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CPNE1Q99829 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms