Protein–RNA interactions for Protein: Q96FV3

TSPAN17, Tetraspanin-17, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17Q96FV3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TSPAN17Q96FV3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.69■■□□□ 1.54
TSPAN17Q96FV3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TSPAN17Q96FV3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.68■■□□□ 1.54
TSPAN17Q96FV3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.68■■□□□ 1.54
TSPAN17Q96FV3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.68■■□□□ 1.54
TSPAN17Q96FV3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
TSPAN17Q96FV3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
TSPAN17Q96FV3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
TSPAN17Q96FV3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.67■■□□□ 1.54
TSPAN17Q96FV3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TSPAN17Q96FV3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TSPAN17Q96FV3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN17Q96FV3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.66■■□□□ 1.54
TSPAN17Q96FV3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN17Q96FV3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN17Q96FV3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN17Q96FV3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TSPAN17Q96FV3 AL449106.1-201ENST00000608517 1980 ntBASIC24.65■■□□□ 1.54
TSPAN17Q96FV3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TSPAN17Q96FV3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TSPAN17Q96FV3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.65■■□□□ 1.54
TSPAN17Q96FV3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.64■■□□□ 1.54
TSPAN17Q96FV3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.64■■□□□ 1.54
TSPAN17Q96FV3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.64■■□□□ 1.54
TSPAN17Q96FV3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.64■■□□□ 1.53
TSPAN17Q96FV3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
TSPAN17Q96FV3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.63■■□□□ 1.53
TSPAN17Q96FV3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.63■■□□□ 1.53
TSPAN17Q96FV3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TSPAN17Q96FV3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.63■■□□□ 1.53
TSPAN17Q96FV3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
TSPAN17Q96FV3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.63■■□□□ 1.53
TSPAN17Q96FV3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN17Q96FV3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN17Q96FV3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN17Q96FV3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN17Q96FV3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.62■■□□□ 1.53
TSPAN17Q96FV3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.62■■□□□ 1.53
TSPAN17Q96FV3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TSPAN17Q96FV3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
TSPAN17Q96FV3 AP004609.3-201ENST00000610705 1884 ntBASIC24.62■■□□□ 1.53
TSPAN17Q96FV3 RPS2P35-201ENST00000443417 897 ntBASIC24.61■■□□□ 1.53
TSPAN17Q96FV3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TSPAN17Q96FV3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TSPAN17Q96FV3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.6■■□□□ 1.53
TSPAN17Q96FV3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.6■■□□□ 1.53
TSPAN17Q96FV3 LINC01971-201ENST00000617888 1048 ntBASIC24.6■■□□□ 1.53
TSPAN17Q96FV3 WHAMMP3-201ENST00000611636 1609 ntBASIC24.6■■□□□ 1.53
TSPAN17Q96FV3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.6■■□□□ 1.53
TSPAN17Q96FV3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TSPAN17Q96FV3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TSPAN17Q96FV3 AC091060.1-201ENST00000623524 1766 ntBASIC24.58■■□□□ 1.53
TSPAN17Q96FV3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TSPAN17Q96FV3 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.58■■□□□ 1.53
TSPAN17Q96FV3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
TSPAN17Q96FV3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TSPAN17Q96FV3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TSPAN17Q96FV3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TSPAN17Q96FV3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.56■■□□□ 1.52
TSPAN17Q96FV3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TSPAN17Q96FV3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TSPAN17Q96FV3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TSPAN17Q96FV3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TSPAN17Q96FV3 AC142472.1-201ENST00000612013 1741 ntBASIC24.55■■□□□ 1.52
TSPAN17Q96FV3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.54■■□□□ 1.52
TSPAN17Q96FV3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TSPAN17Q96FV3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
TSPAN17Q96FV3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.52■■□□□ 1.52
TSPAN17Q96FV3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.52■■□□□ 1.52
TSPAN17Q96FV3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TSPAN17Q96FV3 AC145676.1-201ENST00000514988 2004 ntBASIC24.51■■□□□ 1.51
TSPAN17Q96FV3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
TSPAN17Q96FV3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
TSPAN17Q96FV3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
TSPAN17Q96FV3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TSPAN17Q96FV3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.51■■□□□ 1.51
TSPAN17Q96FV3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TSPAN17Q96FV3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 DUX4L13-201ENST00000554103 1267 ntBASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 DUX4L15-201ENST00000611059 1267 ntBASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 DUX4L23-201ENST00000615195 1269 ntBASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 DUX4L24-201ENST00000617576 1269 ntBASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 DUX4L22-201ENST00000618238 1269 ntBASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 DUX4L20-201ENST00000619712 1269 ntBASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 DUX4L21-201ENST00000622058 1269 ntBASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 DUX4L10-201ENST00000622460 1267 ntBASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 DUX4L25-201ENST00000624915 1269 ntBASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.5■■□□□ 1.51
TSPAN17Q96FV3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.49■■□□□ 1.51
TSPAN17Q96FV3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TSPAN17Q96FV3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
TSPAN17Q96FV3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
TSPAN17Q96FV3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
TSPAN17Q96FV3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.49■■□□□ 1.51
TSPAN17Q96FV3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TSPAN17Q96FV3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TSPAN17Q96FV3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TSPAN17Q96FV3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms