Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.32■■□□□ 1
SMIM4Q8WVI0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.32■■□□□ 1
SMIM4Q8WVI0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
SMIM4Q8WVI0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMIM4Q8WVI0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMIM4Q8WVI0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMIM4Q8WVI0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.31■■□□□ 1
SMIM4Q8WVI0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.31■■□□□ 1
SMIM4Q8WVI0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SMIM4Q8WVI0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMIM4Q8WVI0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMIM4Q8WVI0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM4Q8WVI0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.3■■□□□ 1
SMIM4Q8WVI0 AP002365.1-201ENST00000603448 772 ntBASIC21.3■■□□□ 1
SMIM4Q8WVI0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM4Q8WVI0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM4Q8WVI0 ERN1-208ENST00000606895 2068 ntBASIC21.3■■□□□ 1
SMIM4Q8WVI0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM4Q8WVI0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM4Q8WVI0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM4Q8WVI0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.29■■□□□ 1
SMIM4Q8WVI0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SMIM4Q8WVI0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.29■■□□□ 1
SMIM4Q8WVI0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.29■■□□□ 1
SMIM4Q8WVI0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM4Q8WVI0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM4Q8WVI0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.28■■□□□ 1
SMIM4Q8WVI0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.28■■□□□ 1
SMIM4Q8WVI0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM4Q8WVI0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM4Q8WVI0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.27■■□□□ 1
SMIM4Q8WVI0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.27■■□□□ 1
SMIM4Q8WVI0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM4Q8WVI0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.27■■□□□ 1
SMIM4Q8WVI0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SMIM4Q8WVI0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.27■□□□□ 0.99
SMIM4Q8WVI0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM4Q8WVI0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM4Q8WVI0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM4Q8WVI0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM4Q8WVI0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM4Q8WVI0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM4Q8WVI0 AP004609.3-201ENST00000610705 1884 ntBASIC21.26■□□□□ 0.99
SMIM4Q8WVI0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.25■□□□□ 0.99
SMIM4Q8WVI0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM4Q8WVI0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.25■□□□□ 0.99
SMIM4Q8WVI0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.25■□□□□ 0.99
SMIM4Q8WVI0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SMIM4Q8WVI0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM4Q8WVI0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.24■□□□□ 0.99
SMIM4Q8WVI0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM4Q8WVI0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM4Q8WVI0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
SMIM4Q8WVI0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM4Q8WVI0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM4Q8WVI0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM4Q8WVI0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SMIM4Q8WVI0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMIM4Q8WVI0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM4Q8WVI0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM4Q8WVI0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM4Q8WVI0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.22■□□□□ 0.99
SMIM4Q8WVI0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM4Q8WVI0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM4Q8WVI0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM4Q8WVI0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM4Q8WVI0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SMIM4Q8WVI0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SMIM4Q8WVI0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM4Q8WVI0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM4Q8WVI0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM4Q8WVI0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM4Q8WVI0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM4Q8WVI0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM4Q8WVI0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM4Q8WVI0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.19■□□□□ 0.98
SMIM4Q8WVI0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.18■□□□□ 0.98
SMIM4Q8WVI0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.18■□□□□ 0.98
SMIM4Q8WVI0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM4Q8WVI0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM4Q8WVI0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM4Q8WVI0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.17■□□□□ 0.98
SMIM4Q8WVI0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM4Q8WVI0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM4Q8WVI0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM4Q8WVI0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM4Q8WVI0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM4Q8WVI0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM4Q8WVI0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM4Q8WVI0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SMIM4Q8WVI0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SMIM4Q8WVI0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SMIM4Q8WVI0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM4Q8WVI0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMIM4Q8WVI0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM4Q8WVI0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SMIM4Q8WVI0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM4Q8WVI0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.15■□□□□ 0.98
SMIM4Q8WVI0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM4Q8WVI0 AC142381.3-201ENST00000568208 1670 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms