Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RAP2CP1-202ENST00000605179 643 ntBASIC30.97■■■□□ 2.55
SNED1Q8TER0 SMPD5-203ENST00000639008 1464 ntBASIC30.96■■■□□ 2.55
SNED1Q8TER0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.96■■■□□ 2.55
SNED1Q8TER0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SNED1Q8TER0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
SNED1Q8TER0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.95■■■□□ 2.54
SNED1Q8TER0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
SNED1Q8TER0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC30.94■■■□□ 2.54
SNED1Q8TER0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SNED1Q8TER0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.94■■■□□ 2.54
SNED1Q8TER0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SNED1Q8TER0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
SNED1Q8TER0 AP004833.2-201ENST00000532228 1454 ntBASIC30.94■■■□□ 2.54
SNED1Q8TER0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
SNED1Q8TER0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SNED1Q8TER0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SNED1Q8TER0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.92■■■□□ 2.54
SNED1Q8TER0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNED1Q8TER0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNED1Q8TER0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.92■■■□□ 2.54
SNED1Q8TER0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
SNED1Q8TER0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.91■■■□□ 2.54
SNED1Q8TER0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.91■■■□□ 2.54
SNED1Q8TER0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SNED1Q8TER0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.9■■■□□ 2.54
SNED1Q8TER0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SNED1Q8TER0 AL359258.2-201ENST00000564063 1566 ntBASIC30.9■■■□□ 2.54
SNED1Q8TER0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SNED1Q8TER0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SNED1Q8TER0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.9■■■□□ 2.54
SNED1Q8TER0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
SNED1Q8TER0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.89■■■□□ 2.54
SNED1Q8TER0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
SNED1Q8TER0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
SNED1Q8TER0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SNED1Q8TER0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SNED1Q8TER0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
SNED1Q8TER0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.88■■■□□ 2.53
SNED1Q8TER0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SNED1Q8TER0 AC100797.4-201ENST00000631653 1827 ntBASIC30.87■■■□□ 2.53
SNED1Q8TER0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.86■■■□□ 2.53
SNED1Q8TER0 RP9P-202ENST00000450133 1212 ntBASIC30.86■■■□□ 2.53
SNED1Q8TER0 AC093536.1-201ENST00000569153 554 ntBASIC30.86■■■□□ 2.53
SNED1Q8TER0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.86■■■□□ 2.53
SNED1Q8TER0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
SNED1Q8TER0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SNED1Q8TER0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.85■■■□□ 2.53
SNED1Q8TER0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SNED1Q8TER0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC30.85■■■□□ 2.53
SNED1Q8TER0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC30.85■■■□□ 2.53
SNED1Q8TER0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SNED1Q8TER0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.84■■■□□ 2.53
SNED1Q8TER0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
SNED1Q8TER0 AC010980.1-201ENST00000587192 1142 ntBASIC30.83■■■□□ 2.53
SNED1Q8TER0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.82■■■□□ 2.53
SNED1Q8TER0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.82■■■□□ 2.52
SNED1Q8TER0 AC009299.2-201ENST00000482477 511 ntBASIC30.82■■■□□ 2.52
SNED1Q8TER0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC30.82■■■□□ 2.52
SNED1Q8TER0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.52
SNED1Q8TER0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SNED1Q8TER0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SNED1Q8TER0 AL592295.1-201ENST00000400984 884 ntBASIC30.81■■■□□ 2.52
SNED1Q8TER0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SNED1Q8TER0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
SNED1Q8TER0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
SNED1Q8TER0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.81■■■□□ 2.52
SNED1Q8TER0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SNED1Q8TER0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
SNED1Q8TER0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.81■■■□□ 2.52
SNED1Q8TER0 AC103834.1-201ENST00000520383 144 ntBASIC30.81■■■□□ 2.52
SNED1Q8TER0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC30.81■■■□□ 2.52
SNED1Q8TER0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.8■■■□□ 2.52
SNED1Q8TER0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SNED1Q8TER0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
SNED1Q8TER0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SNED1Q8TER0 ST7-AS1-201ENST00000456775 1889 ntBASIC30.79■■■□□ 2.52
SNED1Q8TER0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SNED1Q8TER0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30.79■■■□□ 2.52
SNED1Q8TER0 PVT1_1.1-201ENST00000615125 194 ntBASIC30.79■■■□□ 2.52
SNED1Q8TER0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.79■■■□□ 2.52
SNED1Q8TER0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SNED1Q8TER0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SNED1Q8TER0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC30.78■■■□□ 2.52
SNED1Q8TER0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.78■■■□□ 2.52
SNED1Q8TER0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
SNED1Q8TER0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SNED1Q8TER0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
SNED1Q8TER0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.78■■■□□ 2.52
SNED1Q8TER0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SNED1Q8TER0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.77■■■□□ 2.52
SNED1Q8TER0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SNED1Q8TER0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SNED1Q8TER0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC30.76■■■□□ 2.51
SNED1Q8TER0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.75■■■□□ 2.51
SNED1Q8TER0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SNED1Q8TER0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SNED1Q8TER0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
SNED1Q8TER0 AC074183.2-201ENST00000623112 922 ntBASIC30.73■■■□□ 2.51
SNED1Q8TER0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SNED1Q8TER0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.73■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms