Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNRF1Q8ND25 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNRF1Q8ND25 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNRF1Q8ND25 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ZNRF1Q8ND25 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNRF1Q8ND25 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNRF1Q8ND25 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF1Q8ND25 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF1Q8ND25 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF1Q8ND25 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ZNRF1Q8ND25 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF1Q8ND25 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF1Q8ND25 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ZNRF1Q8ND25 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF1Q8ND25 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF1Q8ND25 AC148477.6-201ENST00000623746 465 ntBASIC20.85■□□□□ 0.93
ZNRF1Q8ND25 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ZNRF1Q8ND25 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNRF1Q8ND25 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ZNRF1Q8ND25 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF1Q8ND25 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF1Q8ND25 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF1Q8ND25 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNRF1Q8ND25 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ZNRF1Q8ND25 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF1Q8ND25 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.83■□□□□ 0.93
ZNRF1Q8ND25 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.83■□□□□ 0.92
ZNRF1Q8ND25 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
ZNRF1Q8ND25 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.83■□□□□ 0.92
ZNRF1Q8ND25 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.83■□□□□ 0.92
ZNRF1Q8ND25 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF1Q8ND25 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF1Q8ND25 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ZNRF1Q8ND25 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF1Q8ND25 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.81■□□□□ 0.92
ZNRF1Q8ND25 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNRF1Q8ND25 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
ZNRF1Q8ND25 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF1Q8ND25 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF1Q8ND25 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF1Q8ND25 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ZNRF1Q8ND25 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNRF1Q8ND25 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNRF1Q8ND25 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNRF1Q8ND25 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNRF1Q8ND25 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNRF1Q8ND25 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ZNRF1Q8ND25 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF1Q8ND25 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF1Q8ND25 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF1Q8ND25 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.79■□□□□ 0.92
ZNRF1Q8ND25 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF1Q8ND25 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF1Q8ND25 AL121749.1-202ENST00000609313 2153 ntBASIC20.79■□□□□ 0.92
ZNRF1Q8ND25 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF1Q8ND25 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNRF1Q8ND25 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ZNRF1Q8ND25 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ZNRF1Q8ND25 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ZNRF1Q8ND25 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZNRF1Q8ND25 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNRF1Q8ND25 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNRF1Q8ND25 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNRF1Q8ND25 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNRF1Q8ND25 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
ZNRF1Q8ND25 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ZNRF1Q8ND25 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ZNRF1Q8ND25 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.76■□□□□ 0.91
ZNRF1Q8ND25 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNRF1Q8ND25 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.76■□□□□ 0.91
ZNRF1Q8ND25 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNRF1Q8ND25 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNRF1Q8ND25 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNRF1Q8ND25 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ZNRF1Q8ND25 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF1Q8ND25 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.75■□□□□ 0.91
ZNRF1Q8ND25 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF1Q8ND25 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF1Q8ND25 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNRF1Q8ND25 WHAMMP3-201ENST00000611636 1609 ntBASIC20.75■□□□□ 0.91
ZNRF1Q8ND25 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ZNRF1Q8ND25 AL449106.1-201ENST00000608517 1980 ntBASIC20.74■□□□□ 0.91
ZNRF1Q8ND25 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZNRF1Q8ND25 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNRF1Q8ND25 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZNRF1Q8ND25 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNRF1Q8ND25 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ZNRF1Q8ND25 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
ZNRF1Q8ND25 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNRF1Q8ND25 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ZNRF1Q8ND25 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNRF1Q8ND25 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 MIR4449-201ENST00000578365 66 ntBASIC20.72■□□□□ 0.91
ZNRF1Q8ND25 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms