Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RP9P-202ENST00000450133 1212 ntBASIC25.91■■□□□ 1.74
SLC44A3Q8N4M1 AC010980.1-201ENST00000587192 1142 ntBASIC25.91■■□□□ 1.74
SLC44A3Q8N4M1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.91■■□□□ 1.74
SLC44A3Q8N4M1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SLC44A3Q8N4M1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
SLC44A3Q8N4M1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
SLC44A3Q8N4M1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC44A3Q8N4M1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.9■■□□□ 1.74
SLC44A3Q8N4M1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SLC44A3Q8N4M1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.9■■□□□ 1.74
SLC44A3Q8N4M1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.89■■□□□ 1.74
SLC44A3Q8N4M1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SLC44A3Q8N4M1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SLC44A3Q8N4M1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SLC44A3Q8N4M1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SLC44A3Q8N4M1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.89■■□□□ 1.74
SLC44A3Q8N4M1 AC074183.2-201ENST00000623112 922 ntBASIC25.89■■□□□ 1.74
SLC44A3Q8N4M1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SLC44A3Q8N4M1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
SLC44A3Q8N4M1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
SLC44A3Q8N4M1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SLC44A3Q8N4M1 AP004833.2-201ENST00000532228 1454 ntBASIC25.88■■□□□ 1.73
SLC44A3Q8N4M1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SLC44A3Q8N4M1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SLC44A3Q8N4M1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC44A3Q8N4M1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC44A3Q8N4M1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC44A3Q8N4M1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.87■■□□□ 1.73
SLC44A3Q8N4M1 AC093536.1-201ENST00000569153 554 ntBASIC25.87■■□□□ 1.73
SLC44A3Q8N4M1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
SLC44A3Q8N4M1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SLC44A3Q8N4M1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.86■■□□□ 1.73
SLC44A3Q8N4M1 SPCS2P3-201ENST00000500401 656 ntBASIC25.86■■□□□ 1.73
SLC44A3Q8N4M1 RAP2CP1-202ENST00000605179 643 ntBASIC25.86■■□□□ 1.73
SLC44A3Q8N4M1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SLC44A3Q8N4M1 KRT8P33-201ENST00000508125 1423 ntBASIC25.86■■□□□ 1.73
SLC44A3Q8N4M1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SLC44A3Q8N4M1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLC44A3Q8N4M1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC44A3Q8N4M1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC44A3Q8N4M1 AC100797.4-201ENST00000631653 1827 ntBASIC25.84■■□□□ 1.73
SLC44A3Q8N4M1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC44A3Q8N4M1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.84■■□□□ 1.73
SLC44A3Q8N4M1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.84■■□□□ 1.73
SLC44A3Q8N4M1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SLC44A3Q8N4M1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC44A3Q8N4M1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC44A3Q8N4M1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
SLC44A3Q8N4M1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC44A3Q8N4M1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
SLC44A3Q8N4M1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.83■■□□□ 1.73
SLC44A3Q8N4M1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.82■■□□□ 1.72
SLC44A3Q8N4M1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
SLC44A3Q8N4M1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC44A3Q8N4M1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.82■■□□□ 1.72
SLC44A3Q8N4M1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.82■■□□□ 1.72
SLC44A3Q8N4M1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
SLC44A3Q8N4M1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC44A3Q8N4M1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.81■■□□□ 1.72
SLC44A3Q8N4M1 AC009299.2-201ENST00000482477 511 ntBASIC25.81■■□□□ 1.72
SLC44A3Q8N4M1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SLC44A3Q8N4M1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.81■■□□□ 1.72
SLC44A3Q8N4M1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
SLC44A3Q8N4M1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.8■■□□□ 1.72
SLC44A3Q8N4M1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC44A3Q8N4M1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC44A3Q8N4M1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SLC44A3Q8N4M1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC44A3Q8N4M1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC44A3Q8N4M1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC44A3Q8N4M1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.8■■□□□ 1.72
SLC44A3Q8N4M1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC44A3Q8N4M1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
SLC44A3Q8N4M1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.79■■□□□ 1.72
SLC44A3Q8N4M1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC44A3Q8N4M1 AC139795.1-202ENST00000500444 432 ntBASIC25.79■■□□□ 1.72
SLC44A3Q8N4M1 AC103834.1-201ENST00000520383 144 ntBASIC25.79■■□□□ 1.72
SLC44A3Q8N4M1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SLC44A3Q8N4M1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.78■■□□□ 1.72
SLC44A3Q8N4M1 YBX1P4-201ENST00000392794 808 ntBASIC25.78■■□□□ 1.72
SLC44A3Q8N4M1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.78■■□□□ 1.72
SLC44A3Q8N4M1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.78■■□□□ 1.72
SLC44A3Q8N4M1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
SLC44A3Q8N4M1 MIR6765-201ENST00000614092 87 ntBASIC25.78■■□□□ 1.72
SLC44A3Q8N4M1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLC44A3Q8N4M1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.78■■□□□ 1.72
SLC44A3Q8N4M1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
SLC44A3Q8N4M1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC44A3Q8N4M1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC44A3Q8N4M1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.77■■□□□ 1.72
SLC44A3Q8N4M1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC44A3Q8N4M1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.77■■□□□ 1.72
SLC44A3Q8N4M1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SLC44A3Q8N4M1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.76■■□□□ 1.71
SLC44A3Q8N4M1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.76■■□□□ 1.71
SLC44A3Q8N4M1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SLC44A3Q8N4M1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.76■■□□□ 1.71
SLC44A3Q8N4M1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SLC44A3Q8N4M1 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.75■■□□□ 1.71
SLC44A3Q8N4M1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms